DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and SSC5D

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001138422.1 Gene:SSC5D / 284297 HGNCID:26641 Length:1573 Species:Homo sapiens


Alignment Length:798 Identity:143/798 - (17%)
Similarity:226/798 - (28%) Gaps:337/798 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GSISESSSLSSSNSIVRRHSSHYYPMLEDKQKPSQLPQAATEMLVNMTEQKYCQSAHQGASIAGG 133
            |.::...|.|.:.|::.:.::         :.|.::|::..:.:....::               
Human   598 GELATKPSASVTASVLEKTTT---------KAPGKMPKSTKKWVTKNAKR--------------- 638

  Fly   134 RQVHHQQQHLVRVDTPVTPPPPIPRRLLRGKSAWQASSPHPL---------------PLS----- 178
                           |.|.||.:|..    |.: :|.||..|               |.|     
Human   639 ---------------PTTQPPVMPTT----KHS-RAQSPPDLTSQTTAALTTEASRRPTSEFTRR 683

  Fly   179 ----AGGQDGAHGTGTGTVFVYPQ-----------------PENVTAEAVVRGSGDGQGGGGAGL 222
                |..:..:|.|.|.|    ||                 |:.:|:|:.::....      |.|
Human   684 PTTEAPQRWTSHTTATLT----PQAPRERTTKTMAMLTTQGPQEMTSESTIKSIPQ------ASL 738

  Fly   223 Q-SALLVDIATRPASGYADADGISDDDRMSLENSVFDESLTSTPVKVAGYL----AGRY------ 276
            : ||.:.:.:.......|.:..:|...    |:.:|...|...|.:.||.|    |||:      
Human   739 EPSAEIPEGSPESPKDPAPSPSVSTTG----ESGLFRVRLADGPNRCAGRLEVWHAGRWGTVCDD 799

  Fly   277 ----------------------AGLSHM-------------AKRAQRSSSSTVDSAYGSSLGGHS 306
                                  .|.:|.             .|.::.|.|.....|:|.....|.
Human   800 NWDLRDATVACWELGCGKVRPRVGKTHYGPGTGPIWLDDMGCKGSEASLSDCPSGAWGKHNCDHE 864

  Fly   307 ERFASSSTSVDFRSRFSSVDTQSSLDEKPLSSSIDSPLARDPRDAYRERAVLNDAMHKLNNNNTS 371
            |....:.|.            .:..|:.|       |...||..  ||         .|....|:
Human   865 EDVGLTCTG------------YTDYDDYP-------PWTWDPTS--RE---------DLAKGTTT 899

  Fly   372 LGLALYSASNNNNGSSVASDGSQLPVVPARKQPPPVKGSSNSSNSIGETQSQSSKE--------- 427
            .|:                .|..||....|:       ..:||.:|.......||:         
Human   900 AGV----------------PGHTLPWRTTRR-------PGSSSPAIRRLPDTGSKDGYKLPWTWD 941

  Fly   428 -PSSVSASASTSSAASAGSSTISSGTMSSMSG---------------PCPAVVPPTDAITKRPGP 476
             ||....:..|.:|...| .|:.:||..|...               |.|...||..|.| |..|
Human   942 TPSGRGLAEGTPTAGKLG-PTLGAGTTRSPGSPPTLRVHGDTGSPRKPWPERRPPRPAAT-RTAP 1004

  Fly   477 PEPPLRQANVFDPVETGSRGHPPPPLT------------VRNKLGRNKP---PPITYPRMQQRQD 526
            |.|        .|..:.|.|.|.|.||            :.::...:.|   ||...|..:...|
Human  1005 PTP--------SPGPSASPGPPGPALTSDSSRELTPHSALTSEATSDAPDTSPPTPDPASRTNPD 1061

  Fly   527 STLSSDSYSISSS-----------------PGYNSKLMEAPLLGSQQGGRKSNAPGSAQ----RQ 570
            ..|:|..:::|:.                 |....:|...|...|:.   .|.:|.|.|    ..
Human  1062 LILTSPDFALSTPDSSVVPALTPEPSPTPLPTLPKELTSDPSTPSEV---TSLSPTSEQVPESDT 1123

  Fly   571 TPLMDLAPTRFLGGAGGGTGSGKQGPAMPPPRSKINFRQDSTISSDSFSQTSSPGYNPKLMEAPL 635
            ||.:|..|                              ..||:|..|.|...||..:|.....|.
Human  1124 TPDLDTTP------------------------------YSSTVSEYSRSPDPSPSPHPTTTPDPT 1158

  Fly   636 LPSLSAKRLCSAPAPIVCRQGVQHEPIEELEPPQTISPLHKAAGQPSSLQTIVRFQNGAPHTMSL 700
            :            ||         :||..|.|  |::|.......|::          .||..::
Human  1159 M------------AP---------DPITTLNP--TVTPHFPTTPHPTT----------TPHPTTI 1190

  Fly   701 QH--QIINRRKSSNPYIT 716
            .|  .|.:...:..|:.|
Human  1191 THSTMIPDPTTTPQPFTT 1208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
SRCR 992..1086 CDD:278931
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
SSC5DNP_001138422.1 SR 20..119 CDD:214555
SRCR 25..120 CDD:278931
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 153..192
SR 198..298 CDD:214555
SRCR 203..298 CDD:278931
SR 304..403 CDD:214555
SRCR 309..403 CDD:278931
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..465
SR 467..568 CDD:214555
SRCR 472..568 CDD:278931
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 614..769 31/212 (15%)
SR 772..872 CDD:214555 17/99 (17%)
SRCR 777..872 CDD:278931 16/94 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 895..1475 81/413 (20%)
SOBP <1331..1479 CDD:291927
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1554..1573
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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