DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Tmprss5

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_695223.2 Gene:Tmprss5 / 266681 RGDID:628625 Length:445 Species:Rattus norvegicus


Alignment Length:402 Identity:126/402 - (31%)
Similarity:196/402 - (48%) Gaps:62/402 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   968 IDCPYGQDERNCL-----RLSER-NGDVGTGVLEVYRIGQRQWMPACVKNWDRAVSPSAVCSILG 1026
            :.||....|...|     .:|.| ||:  ..:|||....:..|:..|.:.|:.|:. ..:|..||
  Rat    81 LSCPGVSSEEKLLPSLPKAVSFRINGE--DLLLEVQVRARPDWLLVCHEGWNPALG-MHICQSLG 142

  Fly  1027 Y------SAVNATSV-------LTQLTHRPLLATVNVSTDIWKMYAKRKSTLMQEFANCKKTEDY 1078
            |      .|||.:.:       ..||:.||    .::..:.|           |...||....  
  Rat   143 YFRLTQHKAVNLSDIKLNRSQEFAQLSARP----GSLVEEAW-----------QPSTNCPSGR-- 190

  Fly  1079 PMADLTCSNYECGRVKRGRHKP-SRRIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVL 1142
             :..|.||  |||.      :| :.||:||...:.|.||:.|:::.|....  |...:::..||:
  Rat   191 -IVSLKCS--ECGA------RPLASRIVGGQAVASGRWPWQASVMLGSRHT--CGASVLAPYWVV 244

  Fly  1143 TASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATR 1207
            ||:||:.::.:..|..|.:..|:. .:|.....|...|:.:||||.|: |..||.|:||.||.|.
  Rat   245 TAAHCMYSFRLSRLSSWRVHAGLV-SHSAVRQHQGTMVEKIIPHPLYS-AQNHDYDVALLQLRTP 307

  Fly  1208 VAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEY-IVNEVQVPIITRNQCD-EW 1270
            :.|.:.:..||||... ::...|:.|.|.|||   ..||..|:.. .:.:..||:::.:.|: ..
  Rat   308 INFSDTVSAVCLPAKE-QHFPQGSQCWVSGWG---HTDPSHTHSSDTLQDTMVPLLSTDLCNSSC 368

  Fly  1271 LDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYAN 1335
            :.:..::..|:|||:.||..|||||||||||:||   ..:.|.:.|:||||..||.|..|||||.
  Rat   369 MYSGALTHRMLCAGYLDGRADACQGDSGGPLVCP---SGDTWHLVGVVSWGRGCAEPNRPGVYAK 430

  Fly  1336 VVQYVPWIQEQI 1347
            |.:::.||.:.:
  Rat   431 VAEFLDWIHDTV 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060 3/10 (30%)
SR 980..>1034 CDD:214555 19/65 (29%)
Tryp_SPc 1104..1346 CDD:238113 88/243 (36%)
Tmprss5NP_695223.2 SRCR_2 106..203 CDD:464747 29/125 (23%)
Tryp_SPc 208..441 CDD:238113 88/243 (36%)
Blue background indicates that the domain is not in the aligned region.

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