DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and Mfrp

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_667337.1 Gene:Mfrp / 259172 MGIID:2385957 Length:584 Species:Mus musculus


Alignment Length:546 Identity:116/546 - (21%)
Similarity:180/546 - (32%) Gaps:160/546 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 SKEPSSVSASASTSSAASAGSSTISSGTMSSMSGPCPAVVPPTDAITKRPGPPE--PPLRQ---- 483
            |..|::.:.:.:|:.|.:.......|.|..:   .|..::|........|..|:  |||..    
Mouse   118 STTPNTTTTTTTTTPARTGQQEAAMSPTHQT---TCGGLLPGPSGFFSSPNYPDLYPPLSHCVWH 179

  Fly   484 ----------------------ANVFDPVETGSRGHPPPPLTVRNKLGR--NKPPPIT------Y 518
                                  ..:||.:|..|  .|..||.      |  .|.||.|      :
Mouse   180 IQVAAGQTIQLKIQALSIESMLTCLFDRLEIIS--EPTGPLL------RVCGKTPPATLNTNTSH 236

  Fly   519 PRMQQRQDSTLSSDSYSI---SSSPG--------YNSKLMEAPLLGSQQGGRKSNAPGSAQRQTP 572
            .|:....|:.:....:..   :.:||        ::..|:......|...|....|.||.:....
Mouse   237 LRVSFVSDNDVEGSGFQAWYQAVAPGHWSCAHNEFHCDLLLCLKRDSVCDGITECADGSDEANCS 301

  Fly   573 LMDLAPTRFLGGAGGGTGSGKQGPAMPP------PRSKI------------------NFRQDSTI 613
            ...|       |.||.. :|..|....|      |..::                  ||..:   
Mouse   302 AKTL-------GCGGNL-TGLYGVFSTPNYPQHYPHQQLCTWYIEVPVGYGIRLEFHNFSLE--- 355

  Fly   614 SSDSFSQTSSPGYNPKLMEAPLLPSLS-AKRLCSAPAPIVCRQGVQHEPIEELEPP-QTISPLHK 676
                 :|........::.||..|.:.| ..|.|.|                  ||| ..:|.:|:
Mouse   356 -----AQAECKFDYVEVYEASNLGTFSFLGRFCGA------------------EPPLNVVSSMHQ 397

  Fly   677 AAGQPSSLQTIVRFQNGAPHTMSLQHQIINRRKSSNPYITNGRLKFRLFQILINAFALLAIAGGL 741
            .|   ...:|.:...:|.   ....:|.||..:|..|:                  |....:|| 
Mouse   398 LA---VIFKTDLGISSGG---FLATYQAINTTESGCPW------------------AEFCQSGG- 437

  Fly   742 AAYFNAYPTIKFVN---KTIINTIHVEDTTSFGKNPAPG-TCLPIIVRFCQGPQIPYNYTVFPN- 801
                  |..::::.   |...|..:  |..|...:|.|. ||.|:.|..|.|  :.||.|.||| 
Mouse   438 ------YRDLQWMCDLWKDCANDSN--DNCSSHLSPQPDLTCEPVQVEMCLG--LSYNTTAFPNI 492

  Fly   802 YIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTLCTETMRRCGFF 866
            ::|...|.|....|..|::|..:.||:....|||.|.||:|...|..:|||:::|....::|...
Mouse   493 WVGLATQTEVTDILRGYKSLTSLPCYQTFQRFLCGLLVPRCTSLGTILPPCRSVCQAAEQQCQSS 557

  Fly   867 FDVFGLSLPEYLNCKLFKDFPSSEDC 892
            ..:.|...|  .||.......|.|.|
Mouse   558 LALLGTPWP--FNCNRLPVAASLEAC 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 40/116 (34%)
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
SRCR 992..1086 CDD:278931
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
MfrpNP_667337.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..140 4/21 (19%)
CUB 150..258 CDD:238001 21/115 (18%)
LDLa 266..300 CDD:238060 6/33 (18%)
CUB 307..419 CDD:238001 24/144 (17%)
Fz 471..573 CDD:279700 36/105 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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