DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Scart2

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001121618.1 Gene:Scart2 / 244234 MGIID:2443685 Length:1112 Species:Mus musculus


Alignment Length:656 Identity:132/656 - (20%)
Similarity:204/656 - (31%) Gaps:225/656 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   809 LETQTDLDSYEALVDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLS 873
            |||:|.          .|.:.|||..||   ||....| ||.........|:.....:.....:|
Mouse   239 LETETG----------TCSDRVSLGNCT---PKEIWHG-TVLSWAVAFDATLLEPSSWEQQRVVS 289

  Fly   874 LPEYLNCKLFKDFPSSEDCVGLDEVREVMRAATHPKCDGFQCDQN-----RCLPQEY---VCDGH 930
            .|..| |.|.:|...|:...|..|.:.|....|  :.|.|.|..|     :|..|.|   ||.||
Mouse   290 APGVL-CMLLQDEEWSKTHQGSQEQKFVSCQGT--EADIFYCKINVNFAEQCDLQSYTQVVCTGH 351

  Fly   931 LD-------------------------CMDQAD----EAKCERCGPDEIYCGDS-QCIGTKHI-- 963
            ::                         |.|..|    ...|...|     ||.: ..:|:.|.  
Mouse   352 VEARLLGGVHPCEGRLEVLRGLTWGTVCHDDLDLPMAHVVCRELG-----CGTAVSILGSSHFGY 411

  Fly   964 -----------CDG----IIDC------PYGQDERNCLRLSER-----NGDVG-TGVLEVYRIGQ 1001
                       |.|    :..|      ..|.|:...|..|..     ||... .|.:|:  :.|
Mouse   412 GSGPLWTEAFRCMGNESLLFHCLREPGHQCGHDQDAALICSGEKFRLVNGSSRCEGRVEL--LVQ 474

  Fly  1002 RQWMPACVKNWDRAVSPSAVCSIL--GYSAVNATSVLTQLTHRPLLATVNVSTDIWKMYAKRKST 1064
            ..|.|.|..|||.| ..:.:|..|  ||:                     |:|.....:...:..
Mouse   475 DAWQPLCAANWDLA-DATVLCHQLNCGYA---------------------VATPQGGHFGNVEGP 517

  Fly  1065 LMQEFANCKKTEDYPM-----------------ADLTCSNYECG-RVKRGRHKPSRRI---IGGT 1108
            :..:..:|..||.:.:                 |...||..:.. |::.|:.....|:   :.||
Mouse   518 IRTDVFHCVGTEPHLLSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGT 582

  Fly  1109 --QASPGNWPFL-AAI----LG-GPEKIFYCA----------GVLISDQWVLTASHCVGNYSVID 1155
              :.....|... ||:    || |..::.|.|          |        |:..||:|:     
Mouse   583 WGRVLDSAWDLRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVG--------LSLVHCLGS----- 634

  Fly  1156 LEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRV-AFHEHLL-PVC 1218
             |....|..|:.  |.......::...|:.....::.:|...:    :.|.|| .|::... .||
Mouse   635 -ETHLTQCNVSA--SLLVHAGTLRDAGVVCSGSLHIRLAAGKN----RCAGRVEVFYQGTWGTVC 692

  Fly  1219 LPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWLDNLTVSEGMVCA 1283
            .....:::.|  .:|..:|.|........:.:......:            |:|.|.      |.
Mouse   693 DDAWDLQDAH--VVCRQLGCGHALSAPRAAHFGAGTGRI------------WMDELG------CM 737

  Fly  1284 GFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIM-CAHPRLPGVYANVVQYVPWIQEQI 1347
            | ::.....||  |||                    ||.. |.|....||..:     .:|..::
Mouse   738 G-EEAALWECQ--SGG--------------------WGQQDCGHKEDAGVICS-----EFIDVRL 774

  Fly  1348 AKHSRP 1353
            .:||:|
Mouse   775 QEHSQP 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 23/84 (27%)
LDLa 911..942 CDD:238060 14/67 (21%)
LDLa 945..979 CDD:238060 10/57 (18%)
SR 980..>1034 CDD:214555 18/61 (30%)
SRCR 992..1086 CDD:278931 20/112 (18%)
Tryp_SPc 1103..1343 CDD:214473 48/263 (18%)
Tryp_SPc 1104..1346 CDD:238113 48/265 (18%)
Scart2NP_001121618.1 SR 33..130 CDD:214555
SRCR <162..233 CDD:366150
SR 355..452 CDD:214555 15/101 (15%)
SR 457..556 CDD:214555 22/122 (18%)
SR 562..662 CDD:214555 23/115 (20%)
SR 667..767 CDD:214555 27/146 (18%)
SR 899..999 CDD:214555
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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