DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and Scart1

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_017177746.1 Gene:Scart1 / 244233 MGIID:2443796 Length:999 Species:Mus musculus


Alignment Length:881 Identity:178/881 - (20%)
Similarity:244/881 - (27%) Gaps:331/881 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   644 LCS-----APAPIVCRQ--------GVQHEPIEELEPPQTISP-LHKAA--GQPSSLQTI---VR 689
            ||:     |.|.:||||        ..::.|:    |.:.:.| ||..:  |..|||...   ..
Mouse    56 LCNLEWTLAEASVVCRQLGCGPAVGAPKYVPL----PGEMVRPWLHNVSCWGNESSLWECSLGAW 116

  Fly   690 FQNGAPH---TMSLQHQIINRRKSSNPYITNGRLKFRLFQILINAFALLAIAGGLAAYFNAYPTI 751
            .|...||   .::|              ..||  .||..: |:...:..|   ||       |.|
Mouse   117 SQRACPHEWVVVAL--------------CANG--TFREIR-LVKGHSPCA---GL-------PEI 154

  Fly   752 KFVNKT-IINTIHVEDTTSFGKNPAPGTCLPI------IVRF--CQGPQIPYNYTVFPNYI---- 803
            ..||.. .:..:|||:.|.|.:....|..|..      :.::  |:|.:.........|.:    
Mouse   155 MNVNGVDRLCGLHVEEATVFCRELQCGHALQAPRQDVGVSKYMTCKGTESTIRNCRLNNKLRGGC 219

  Fly   804 -----------GHF------------GQLET----------QTDLDSYEALVDVRCYEL-VSLFL 834
                       ||.            |:||.          ..|||...|  .|.|.|| ..:.:
Mouse   220 NLLLDAEVICSGHVEARLVGGEHSCAGRLEVLRGLTWGTICHADLDLPTA--HVVCRELGCGIAV 282

  Fly   835 CTLFVPKCGQSGATVPPCKTLCT-----------ETMRRCGFFFDVFGLSLPEYLNCKLFKDFPS 888
            .||...:.||....|......|.           |....||...|.       .|.|..|:....
Mouse   283 STLGGAQFGQGSGPVWLEAFRCVGNESLLFHCPREPGHHCGHEQDA-------ALTCSEFRLVNG 340

  Fly   889 SEDCVGLDEVREVMRAATHPKCDG--------FQCDQNRC------LPQEYVCDGHLDCMDQADE 939
            |.||.|..|::  ::....|.|..        ..|.|..|      .|..:..||  |.:...|.
Mouse   341 SSDCEGRVELQ--VQGTWAPVCAANWDLADAMVLCHQLNCGNAVSVPPGGHFGDG--DDLIWPDI 401

  Fly   940 AKCERCGPDEIYC-----GDSQCI---GTKHICDGIIDCPYGQDERNCLRLSERNG-DVGTGVLE 995
            ..|....|..::|     |...|:   ....||.|:.|         .|||  |:| ....|.:|
Mouse   402 FHCVGTEPHLLHCAASTLGAHGCVLGNTASTICSGLQD---------ILRL--RDGQSYCDGRVE 455

  Fly   996 VYRIGQRQWMPACVKNWDRAVSPSAVCSIL---------------------GYSAVNATSVLTQL 1039
            :...|  .|.......|| ....|.||..|                     |.|.|......|:|
Mouse   456 ISLDG--SWGRVLDDAWD-LHGASVVCRQLGCGEAQRAYDAPAPIFRRVPVGLSQVRCLGSETRL 517

  Fly  1040 THRPLLATVNVSTD---------------------------------IWKMYAKRKSTLMQEFAN 1071
            .|      .||||.                                 :...|.....|:      
Mouse   518 VH------CNVSTSLLVPAGTLRDAGVVCSGSLRVRLAAGPGRCAGRVELFYQGSWGTV------ 570

  Fly  1072 CKKTEDYPMADLTCSNYECGRVKRGRHKPSRRIIGGTQASPGN-WPFLAAILGGPEKIFYC---- 1131
            |....|...|.:.|...:||.....   |.....|   |..|: |......||....::.|    
Mouse   571 CDDAWDLQDAQVVCRQLDCGHALSA---PRNAHFG---AGTGHIWMDELHCLGNESSLWKCQSGS 629

  Fly  1132 -----------AGVLISDQWVLT----ASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVK 1181
                       |||..|:...|.    .|.|||...|:....|    |....|:.    :.:.:.
Mouse   630 WGQHDCRHKEDAGVFCSESVALRLRGGTSGCVGWLDVLYNGSW----GAVCSNAL----RDISLS 686

  Fly  1182 AVI--------------PHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTL 1232
            .:.              |.....:.|:..::|                       ..||||..||
Mouse   687 IICRQLGCGDQGWLENRPSSGAGLGISWVDNI-----------------------KCRNLHNATL 728

  Fly  1233 --CTVIGWGKREDKDPKSTYEYIVN-------EVQVPIITRNQCDEWLDNLTVSEGMVCAGFDDG 1288
              |....|........:..:   :|       .:|.|..|.| |......|..|...|.     |
Mouse   729 WQCPSAPWNPHSCTQEEEVW---INCEGTPQIALQDPAQTPN-CSSPFGCLENSVLRVL-----G 784

  Fly  1289 GKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMC 1324
            |:|.|.            |....|..|   |||.:|
Mouse   785 GEDGCS------------GRVELWHAG---SWGTVC 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 33/172 (19%)
LDLa 911..942 CDD:238060 8/44 (18%)
LDLa 945..979 CDD:238060 8/41 (20%)
SR 980..>1034 CDD:214555 18/75 (24%)
SRCR 992..1086 CDD:278931 25/147 (17%)
Tryp_SPc 1103..1343 CDD:214473 51/265 (19%)
Tryp_SPc 1104..1346 CDD:238113 51/264 (19%)
Scart1XP_017177746.1 SR 32..131 CDD:214555 21/92 (23%)
SRCR 144..230 CDD:366150 17/95 (18%)
SR 236..333 CDD:214555 22/105 (21%)
SR 336..435 CDD:214555 21/102 (21%)
SRCR 446..541 CDD:366150 21/103 (20%)
SR 546..646 CDD:214555 19/111 (17%)
SRCR 656..751 CDD:366150 19/128 (15%)
SR 780..879 CDD:214555 12/46 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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