DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Ctrb1

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_036668.2 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:247 Identity:86/247 - (34%)
Similarity:125/247 - (50%) Gaps:25/247 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1103 RIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTR 1167
            ||:.|..|.||:||:..: |.......:|.|.|||:.||:||:||....|.:      :..|...
  Rat    33 RIVNGEDAIPGSWPWQVS-LQDKTGFHFCGGSLISEDWVVTAAHCGVKTSDV------VVAGEFD 90

  Fly  1168 RNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTL 1232
            :.|...:.|.:|:..|..:|::||.... |||.|.:|||...|.|.:..||||... .:..|||:
  Rat    91 QGSDEENIQVLKIAQVFKNPKFNMFTVR-NDITLLKLATPAQFSETVSAVCLPNVD-DDFPPGTV 153

  Fly  1233 CTVIGWGKRED---KDPKSTYEYIVNEVQVPIITRNQCDE-WLDNLTVSEGMVCAGFDDGGKDAC 1293
            |...||||.:.   |.|:.     :.:..:||::...|.: |...:|  :.|:|||  ..|..:|
  Rat   154 CATTGWGKTKYNALKTPEK-----LQQAALPIVSEADCKKSWGSKIT--DVMICAG--ASGVSSC 209

  Fly  1294 QGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQE 1345
            .|||||||:|...|.   |.:.||||||........|.||:.|...:||:|:
  Rat   210 MGDSGGPLVCQKDGV---WTLAGIVSWGSGVCSTSTPAVYSRVTALMPWVQQ 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 85/246 (35%)
Ctrb1NP_036668.2 Tryp_SPc 34..259 CDD:238113 85/246 (35%)
Blue background indicates that the domain is not in the aligned region.

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