DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and Plg

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_032903.3 Gene:Plg / 18815 MGIID:97620 Length:812 Species:Mus musculus


Alignment Length:633 Identity:149/633 - (23%)
Similarity:235/633 - (37%) Gaps:189/633 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   772 KNPAPGTCLPIIVRFCQGPQ---IPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLF 833
            :.|....|..:...:|:.|.   .|:.||.           ::|...:..|              
Mouse   309 RTPENFPCKNLEENYCRNPDGETAPWCYTT-----------DSQLRWEYCE-------------- 348

  Fly   834 LCTLFVPKC------GQSGATVPP---------C----------KTLCTETMRRCGFFFDVFGLS 873
                 :|.|      .||.::|||         |          .:..|.|.::|..:..:|   
Mouse   349 -----IPSCESSASPDQSDSSVPPEEQTPVVQECYQSDGQSYRGTSSTTITGKKCQSWAAMF--- 405

  Fly   874 LPEYLNCKLFKDFPSS----EDCVGLDEVREVMRAATHPKCDGFQCDQNRC---------LPQEY 925
              .:.:.|..::||.:    ..|...|..:......|.|......|:..||         ||   
Mouse   406 --PHRHSKTPENFPDAGLEMNYCRNPDGDKGPWCYTTDPSVRWEYCNLKRCSETGGSVVELP--- 465

  Fly   926 VCDGHLDCMDQADEAKCERCGPDEIYCGDSQCIGTKHICDGIIDCPYGQDERNCLRLSERNGDVG 990
                         ....|..||.                |...||.||            ||   
Mouse   466 -------------TVSQEPSGPS----------------DSETDCMYG------------NG--- 486

  Fly   991 TGVLEVYRIGQRQWMPACVKNWDRAVSPSAVCSILGYSAVNATSV-----LTQLTHRPLLAT--V 1048
                :.||                           |.:||.|...     ..|..||..:.|  .
Mouse   487 ----KDYR---------------------------GKTAVTAAGTPCQGWAAQEPHRHSIFTPQT 520

  Fly  1049 NVSTDIWKMYAKRKSTLMQ----EFANCKKTEDY---PMADLTCSNYECGRVKRGRHKPSRRIIG 1106
            |....:.|.|.:.....:.    ...|.:|..||   |:. .:.|::|||:.:....|...|::|
Mouse   521 NPRAGLEKNYCRNPDGDVNGPWCYTTNPRKLYDYCDIPLC-ASASSFECGKPQVEPKKCPGRVVG 584

  Fly  1107 GTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRRNSF 1171
            |..|:|.:||:..::........:|.|.||:.:|||||:||:...|  ..|.:.:.||.......
Mouse   585 GCVANPHSWPWQISLRTRFTGQHFCGGTLIAPEWVLTAAHCLEKSS--RPEFYKVILGAHEEYIR 647

  Fly  1172 TYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVI 1236
            ....|::.|..:|..|       ::.||||.:|:......:.::|.|||.|:.. :...|:|.:.
Mouse   648 GLDVQEISVAKLILEP-------NNRDIALLKLSRPATITDKVIPACLPSPNYM-VADRTICYIT 704

  Fly  1237 GWGKREDKDPKSTYEYIVNEVQVPIITRNQCD--EWLDNLTVSEGMVCAGFDDGGKDACQGDSGG 1299
            |||:.:.......    :.|.|:|:|....|:  |:|:| .|....:|||...||.|:|||||||
Mouse   705 GWGETQGTFGAGR----LKEAQLPVIENKVCNRVEYLNN-RVKSTELCAGQLAGGVDSCQGDSGG 764

  Fly  1300 PLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQI 1347
            ||:|   .||:::.:.|:.|||:.||.|..||||..|.::|.||:.::
Mouse   765 PLVC---FEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVDWIEREM 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 24/147 (16%)
LDLa 911..942 CDD:238060 5/39 (13%)
LDLa 945..979 CDD:238060 7/33 (21%)
SR 980..>1034 CDD:214555 8/53 (15%)
Tryp_SPc 1104..1346 CDD:238113 82/243 (34%)
PlgNP_032903.3 PAN_AP_HGF <38..97 CDD:238532
KR 101..183 CDD:214527
KR 183..262 CDD:214527
KR 273..354 CDD:214527 11/74 (15%)
KR 375..456 CDD:214527 15/85 (18%)
KR 480..562 CDD:214527 24/128 (19%)
Tryp_SPc 582..807 CDD:238113 82/242 (34%)
Blue background indicates that the domain is not in the aligned region.

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