DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and Plat

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_032898.2 Gene:Plat / 18791 MGIID:97610 Length:559 Species:Mus musculus


Alignment Length:618 Identity:161/618 - (26%)
Similarity:231/618 - (37%) Gaps:165/618 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   829 LVSLFLCTLFVPKCGQS-------GATV--PPCKTLCTET--MRRCGFFFDVFGLSLPEYLNCKL 882
            |..|.||.|..|...|.       ||..  ..|:...|:|  .:...:...:...|..||..|. 
Mouse     6 LCVLLLCGLAFPLPDQGIHGRFRRGARSYRATCRDEPTQTTYQQHQSWLRPMLRSSRVEYCRCN- 69

  Fly   883 FKDFPSSEDCVGLDEVREV-MRAATHPKC-DGFQCDQNRCLPQEYVC---DGHLDCMDQADEAKC 942
                      .||.:...| :|:.:.|:| :|..|.|.... .::||   ||.:.          
Mouse    70 ----------SGLVQCHSVPVRSCSEPRCFNGGTCQQALYF-SDFVCQCPDGFVG---------- 113

  Fly   943 ERCGPD-EIYCGDSQCI---GTKHICDGIIDC-----------PYGQDERNCLRLSE------RN 986
            :||..| ...|.:.|.|   ||....:...:|           ||.....|.::|..      ||
Mouse   114 KRCDIDTRATCFEEQGITYRGTWSTAESGAECINWNSSVLSLKPYNARRPNAIKLGLGNHNYCRN 178

  Fly   987 GD----------------------------------VGTGVLEVYR------IGQRQWMPACVKN 1011
            .|                                  ||.||  .||      ..|...:|     
Mouse   179 PDRDLKPWCYVFKAGKYTTEFCSTPACPKGKSEDCYVGKGV--TYRGTHSLTTSQASCLP----- 236

  Fly  1012 WDRAVSPSAVCSILG--YSAVNATSVLTQLTHRPLLATVNVSTDIWKMYAKRKSTLMQEFANCKK 1074
            |:..|       ::|  |:|....|....|.........:.....|....|.:          |.
Mouse   237 WNSIV-------LMGKSYTAWRTNSQALGLGRHNYCRNPDGDARPWCHVMKDR----------KL 284

  Fly  1075 TEDYPMADLT-CSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFLAAIL----GGPEKIFYCAGV 1134
            |.:|  .|:: ||.  ||  .|...:|..||.||......:.|:.|||.    ..|.:.|.|.||
Mouse   285 TWEY--CDMSPCST--CG--LRQYKRPQFRIKGGLYTDITSHPWQAAIFVKNKRSPGERFLCGGV 343

  Fly  1135 LISDQWVLTASHCVGNYSVIDLEDW-----TIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIA 1194
            |||..|||:|:||.       ||.:     .:.||.|.|.......|..:::..|.|.::: ...
Mouse   344 LISSCWVLSAAHCF-------LERFPPNHLKVVLGRTYRVVPGEEEQTFEIEKYIVHEEFD-DDT 400

  Fly  1195 HDNDIALFQLATR----VAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVN 1255
            :||||||.||.::    ......:...|||.|::: |...|.|.:.|:||.|...|  .:...:.
Mouse   401 YDNDIALLQLRSQSKQCAQESSSVGTACLPDPNLQ-LPDWTECELSGYGKHEASSP--FFSDRLK 462

  Fly  1256 EVQVPIITRNQC-DEWLDNLTVSEGMVCAGFDDGG-----KDACQGDSGGPLLCPYPGEKNRWFV 1314
            |..|.:...::| .:.|.|.||:..|:|||....|     .|||||||||||:|..   ..:..:
Mouse   463 EAHVRLYPSSRCTSQHLFNKTVTNNMLCAGDTRSGGNQDLHDACQGDSGGPLVCMI---NKQMTL 524

  Fly  1315 GGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQI 1347
            .||:|||:.|....:||||..|..|:.||.:.:
Mouse   525 TGIISWGLGCGQKDVPGVYTKVTNYLDWIHDNM 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 16/75 (21%)
LDLa 911..942 CDD:238060 7/33 (21%)
LDLa 945..979 CDD:238060 10/48 (21%)
SR 980..>1034 CDD:214555 17/101 (17%)
Tryp_SPc 1104..1346 CDD:238113 88/260 (34%)
PlatNP_032898.2 FN1 38..80 CDD:214494 10/52 (19%)
Important for binding to annexin A2. /evidence=ECO:0000250 39..49 2/9 (22%)
EGF 83..115 CDD:394967 9/42 (21%)
Kringle 124..205 CDD:395005 13/80 (16%)
KR 210..295 CDD:238056 21/110 (19%)
Tryp_SPc 311..556 CDD:238113 87/258 (34%)

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