DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and mom-5

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001300437.1 Gene:mom-5 / 172856 WormBaseID:WBGene00003397 Length:570 Species:Caenorhabditis elegans


Alignment Length:141 Identity:44/141 - (31%)
Similarity:67/141 - (47%) Gaps:13/141 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   754 VNKTIINTIHVEDTTSFGKNPAPGTCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSY 818
            ::.|.|::::...||.        .|..|.:..|:  .:.||.|||||.:||..|.|....:..:
 Worm    20 LSSTSISSMNGFSTTR--------KCEHITIPMCK--NLDYNQTVFPNLLGHTTQSEAGPAIAQF 74

  Fly   819 EALVDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLF 883
            ..|:.|:|.|.:.|||||::.|.|......:.||:.||......|......||...|:.|:|   
 Worm    75 NPLIKVKCSEDIRLFLCTVYAPVCTVLEKPIQPCRELCLSAKNGCESLMKKFGFQWPDQLDC--- 136

  Fly   884 KDFPSSEDCVG 894
            ..||.::.|||
 Worm   137 NKFPVTDLCVG 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 38/115 (33%)
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
SRCR 992..1086 CDD:278931
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
mom-5NP_001300437.1 CRD_FZ1_like 35..147 CDD:143567 38/124 (31%)
7tmF_Frizzled_SMO 219..550 CDD:320089
TM helix 1 228..253 CDD:320089
TM helix 2 262..282 CDD:320089
TM helix 3 312..338 CDD:320089
TM helix 4 355..371 CDD:320089
TM helix 5 393..422 CDD:320089
TM helix 6 446..473 CDD:320089
TM helix 7 512..537 CDD:320089
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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