DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Loxl3

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_038614.2 Gene:Loxl3 / 16950 MGIID:1337004 Length:754 Species:Mus musculus


Alignment Length:616 Identity:128/616 - (20%)
Similarity:188/616 - (30%) Gaps:220/616 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   834 LCTLFVPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVGLDEV 898
            ||:..|   |....::.|.|.:.::.:|     |.:.|.....|                   |.
Mouse    20 LCSFSV---GSPSPSISPEKKVGSQGLR-----FRLAGFPRKPY-------------------EG 57

  Fly   899 R-EVMRAATHPKCDGFQCDQNRCLPQEYVCDGHLDCMDQADEAKCERCGP--DEIYCGDSQCIGT 960
            | |:.||...    |..||.:..|...:|....|...:........:.||  ..|:..:..|.||
Mouse    58 RVEIQRAGEW----GTICDDDFTLQAAHVLCRELGFTEATGWTHSAKYGPGTGRIWLDNLSCRGT 118

  Fly   961 KHICD-------GIIDCPYGQDE-------------------------------RNCLRLSERNG 987
            :....       |..||.:.:|.                               |..:....|..
Mouse   119 EGSVTECASRGWGNSDCTHDEDAGVICKDQRLPGFSDSNVIEVEHQLQVEEVRLRPAVEWGRRPL 183

  Fly   988 DVGTGVLEVYRIGQRQWMPACVKNWDRAVSPSAVCSILGYSAVNATSVLTQLTHRPLLATVNVST 1052
            .|..|::|| |:.: .|...|.|.|. |.:...||.:||:               |....||:: 
Mouse   184 PVTEGLVEV-RLPE-GWSQVCDKGWS-AHNSHVVCGMLGF---------------PGEKRVNMA- 229

  Fly  1053 DIWKMYAKRK--STLMQEFANCKKTED---------YPMADLT-CSN-----YEC---------- 1090
             .::|.|::|  |..:...| |..||.         |...|.| ||.     ..|          
Mouse   230 -FYRMLAQKKQHSFGLHSVA-CVGTEAHLSLCSLEFYRANDTTRCSGGNPAVVSCVLGPLYATFT 292

  Fly  1091 GRVKRGRHKPSR----RIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCVGNY 1151
            |:.|:...||..    |:.||.....|....|.|         ...|.:...:|.|.|:      
Mouse   293 GQKKQQHSKPQGEARVRLKGGAHQGEGRVEVLKA---------GTWGTVCDRKWDLQAA------ 342

  Fly  1152 SVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLP 1216
            ||:..|   :..|..|.   ..||.::         ...|...|.:::       |.:..|..|.
Mouse   343 SVVCRE---LGFGTARE---ALSGARM---------GQGMGAIHLSEV-------RCSGQEPSLW 385

  Fly  1217 VCLPPPSVRNL---------HPGTLCTVIGWG---KREDKDPKSTYEYIVNEVQVPIITRNQCDE 1269
            .|   || :|:         ..|..|.:...|   |......:|.||..| |||:.|....:   
Mouse   386 RC---PS-KNITAEDCSHSQDAGVRCNLPYTGVETKIRLSGGRSRYEGRV-EVQIGIPGHLR--- 442

  Fly  1270 WLDNLTVSEGMVCAGFDDGG----KDACQGDSGGPLLCPYP--GEKNRWF-----VGGIVSWGIM 1323
            |        |::|.  ||.|    ..||:     .|...|.  |.:..|:     |..:|..|:.
Mouse   443 W--------GLICG--DDWGTLEAMVACR-----QLGLGYANHGLQETWYWDSGNVTEVVMSGVR 492

  Fly  1324 CAHPRLPGVYANVVQYVPWIQEQIAKHSRPI 1354
            |....|.             ..|.|.||..|
Mouse   493 CTGSELS-------------LNQCAHHSSHI 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 10/59 (17%)
LDLa 911..942 CDD:238060 6/30 (20%)
LDLa 945..979 CDD:238060 11/73 (15%)
SR 980..>1034 CDD:214555 15/53 (28%)
SRCR 992..1086 CDD:278931 27/105 (26%)
Tryp_SPc 1103..1343 CDD:214473 55/262 (21%)
Tryp_SPc 1104..1346 CDD:238113 54/264 (20%)
Loxl3NP_038614.2 SR 46..145 CDD:214555 23/121 (19%)
SRCR 54..146 CDD:278931 22/114 (19%)
SR 170..282 CDD:214555 32/132 (24%)
SRCR 187..282 CDD:278931 29/115 (25%)
SR 308..408 CDD:214555 27/140 (19%)
SRCR 313..408 CDD:278931 25/135 (19%)
SR 418..526 CDD:214555 30/125 (24%)
SRCR 423..526 CDD:278931 30/120 (25%)
Lysyl-oxidase like 530..733
Lysyl_oxidase 531..725 CDD:279521
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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