DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and Tmprss2

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:428 Identity:141/428 - (32%)
Similarity:212/428 - (49%) Gaps:76/428 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   944 RCGPDEIYCGDS-QCIGTKHICDGIIDCPYGQDERNCLRLSERNGDVGTG-VLEVYRIGQRQWMP 1006
            :|...|:.||.| .||.:...|||:..||.|:||..|:||      .||. .|:||...::.|.|
  Rat   111 KCSSSEMECGSSGTCISSSLWCDGVSQCPNGEDENRCVRL------YGTSFTLQVYSSQRKAWYP 169

  Fly  1007 ACVKNWDRAVSPSAVCSILGY-----------SAVNATSVLTQLTHRPLLATVNVSTDIWKMYAK 1060
            .|..:|:.:.. .|.|..:||           ....|||.:          .:|||.....:|.|
  Rat   170 VCQDDWNESYG-RAACKDMGYKNSFYSSQGIPDQSGATSFM----------KLNVSAGNVDLYKK 223

  Fly  1061 RKSTLMQEFANCKKTEDYPMADLTCSNYECG--RVKRGRHKPSRRIIGGTQASPGNWPFLAAILG 1123
                 :....:|...   .:..|.|  .|||  .|:|     ..||:||:.||||:||:..::  
  Rat   224 -----LYHSDSCSSR---MVVSLRC--IECGVRSVRR-----QSRIVGGSTASPGDWPWQVSL-- 271

  Fly  1124 GPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLED-------WTIQLGVTRRNSFTYSGQKVKVK 1181
            ..:.|..|.|.:|:.:|::||:|||        |:       ||...|:.:: |..:.|.:.:|:
  Rat   272 HVQGIHVCGGSIITPEWIVTAAHCV--------EEPLSSPRYWTAFAGILKQ-SLMFYGSRHQVE 327

  Fly  1182 AVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDP 1246
            .||.||.|: :...:|||||.:|.|.:||::.:.|||||.|.:. |.....|.:.|||...:|..
  Rat   328 KVISHPNYD-SKTKNNDIALMKLQTPLAFNDVVKPVCLPNPGMM-LDLAQECWISGWGATYEKGK 390

  Fly  1247 KSTYEYIVNEVQVPIITRNQCD-EWLDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKN 1310
            .|.   ::|...||:|..::|: :::.|..::..|:||||..|..|:|||||||||:.    .||
  Rat   391 TSD---VLNAAMVPLIEPSKCNSKYIYNNLITPAMICAGFLQGSVDSCQGDSGGPLVT----LKN 448

  Fly  1311 R-WFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQI 1347
            . |::.|..|||..||....||||.||..:..||.:|:
  Rat   449 EIWWLIGDTSWGSGCAKAYRPGVYGNVTVFTDWIYQQM 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060 15/34 (44%)
SR 980..>1034 CDD:214555 16/65 (25%)
Tryp_SPc 1104..1346 CDD:238113 92/250 (37%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060 15/34 (44%)
SRCR_2 152..247 CDD:464747 27/115 (23%)
Tryp_SPc 254..485 CDD:238113 92/250 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.