DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Fzd5

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001036124.1 Gene:Fzd5 / 14367 MGIID:108571 Length:585 Species:Mus musculus


Alignment Length:330 Identity:70/330 - (21%)
Similarity:114/330 - (34%) Gaps:76/330 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   775 APGTCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFV 839
            || .|..|.|..|:|  |.||.|..||...|..|.|...::..:..||::.|...:..|||:::.
Mouse    30 AP-VCQEITVPMCRG--IGYNLTHMPNQFNHDTQDEAGLEVHQFWPLVEIHCSPDLRFFLCSMYT 91

  Fly   840 PKC-GQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVGLDEVREVMR 903
            |.| ......:|||:::|......|......:|.:.||.::|..........:.:.:|..|....
Mouse    92 PICLPDYHKPLPPCRSVCERAKAGCSPLMRQYGFAWPERMSCDRLPVLGGDAEVLCMDYNRSEAT 156

  Fly   904 AATHPKCDGFQCDQNRCLPQEYVCDGHLDCMDQADEAKCERCGPDEIYCGDS------------Q 956
            .|: ||          ..|.:....|.........|  |...||....|.:.            .
Mouse   157 TAS-PK----------SFPAKPTLPGPPGAPSSGGE--CPSGGPSVCTCREPFVPILKESHPLYN 208

  Fly   957 CIGTKHICDGIIDC---PYGQDER----------NCLRLSERNGDVGTGVLEV--YRIGQRQ--W 1004
            .:.|..:.:..:.|   .:..|||          :.|.....:..|.|.::::  :|..:|.  :
Mouse   209 KVRTGQVPNCAVPCYQPSFSPDERTFATFWIGLWSVLCFISTSTTVATFLIDMERFRYPERPIIF 273

  Fly  1005 MPACVKNWDRAVSPSAVCSILGY---SAVNATSVLTQLTHR--------PLLATV--------NV 1050
            :.||.           :|..||:   ..|...||.....|.        |.|.||        .:
Mouse   274 LSACY-----------LCVSLGFLVRLVVGHASVACSREHSHIHYETTGPALCTVVFLLVYFFGM 327

  Fly  1051 STDIW 1055
            ::.||
Mouse   328 ASSIW 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 31/116 (27%)
LDLa 911..942 CDD:238060 3/30 (10%)
LDLa 945..979 CDD:238060 8/58 (14%)
SR 980..>1034 CDD:214555 11/60 (18%)
SRCR 992..1086 CDD:278931 17/87 (20%)
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
Fzd5NP_001036124.1 CRD_FZ5 29..156 CDD:143569 35/128 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..182 6/38 (16%)
7tm_GPCRs 225..535 CDD:333717 23/119 (19%)
TM helix 1 235..259 CDD:320095 3/23 (13%)
TM helix 2 268..289 CDD:320095 6/31 (19%)
TM helix 3 316..338 CDD:320095 4/17 (24%)
TM helix 4 359..375 CDD:320095
TM helix 5 397..420 CDD:320095
TM helix 6 448..473 CDD:320095
TM helix 7 496..521 CDD:320095
PDZ-binding. /evidence=ECO:0000250 582..584
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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