DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and Fzd1

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_067432.2 Gene:Fzd1 / 14362 MGIID:1196625 Length:642 Species:Mus musculus


Alignment Length:211 Identity:56/211 - (26%)
Similarity:83/211 - (39%) Gaps:48/211 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   774 PAPGTCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLF 838
            |..|.|.||.:..|  ..|.||.|:.||.:||..|.:...::..:..||.|:|...:..|||:::
Mouse   106 PDHGYCQPISIPLC--TDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSAELKFFLCSMY 168

  Fly   839 VPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVG--------- 894
            .|.|......:|||::||....:.|....:.||...|:.|.|:.|....:.|.|||         
Mouse   169 APVCTVLEQALPPCRSLCERARQGCEALMNKFGFQWPDTLKCEKFPVHGAGELCVGQNTSDKGTP 233

  Fly   895 ----LDEVREVMRAATHPKCDG------------------FQCDQNRCLPQ--EYVCDGHLDCMD 935
                |.|.     ..::|:..|                  |.|.:...:|.  .|...|..||  
Mouse   234 TPSLLPEF-----WTSNPQHGGGGYRGGYPGGAGTVERGKFSCPRALRVPSYLNYHFLGEKDC-- 291

  Fly   936 QADEAKCERCGPDEIY 951
               .|.||   |.::|
Mouse   292 ---GAPCE---PTKVY 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 36/115 (31%)
LDLa 911..942 CDD:238060 9/50 (18%)
LDLa 945..979 CDD:238060 2/7 (29%)
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113
Fzd1NP_067432.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..45
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..99
CRD_FZ1 107..233 CDD:143574 39/127 (31%)
7tmF_FZD1 294..641 CDD:320375 4/11 (36%)
TM helix 1 313..338 CDD:320375
TM helix 2 347..368 CDD:320375
TM helix 3 398..424 CDD:320375
TM helix 4 441..457 CDD:320375
TM helix 5 479..508 CDD:320375
TM helix 6 528..555 CDD:320375
TM helix 7 591..616 CDD:320375
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 620..625
PDZ-binding 640..642
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.