DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and Tmprss3

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001157248.1 Gene:Tmprss3 / 140765 MGIID:2155445 Length:475 Species:Mus musculus


Alignment Length:428 Identity:133/428 - (31%)
Similarity:202/428 - (47%) Gaps:56/428 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   930 HLDCMDQADEAKCERCGPDEIYCGDSQCIGTKHICDGIIDCPYGQDERNCLRLSERNGDVGTGVL 994
            |.||   :.:.:|.         ...:||.....|||:.||...:||..|:|:|.:.     ..|
Mouse    92 HFDC---SGKYRCH---------SSFKCIELTARCDGVSDCKNAEDEYRCVRVSGQR-----AAL 139

  Fly   995 EVYRIGQRQWMPACVKNWDRAVSPSAVCSILGY-SAVNATSVLTQLTHRPL---LATVN--VSTD 1053
            :|:...  .|...|..:|....:..| |:.||: |.|::..:.........   ..::|  :|.|
Mouse   140 QVFTAA--AWRTMCSDDWKSHYAKIA-CAQLGFPSYVSSDHLRVDALEEQFQGDFVSINHLLSDD 201

  Fly  1054 IWKMYAKRKSTLMQEFANCKKTEDYPMADLTCSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFL 1118
              |:.|...|..|:|  .|....   :..|.||  .||  .|..:.|  ||:||..:|...||:.
Mouse   202 --KVTALHHSVYMRE--GCTSGH---VVTLKCS--ACG--TRTGYSP--RIVGGNMSSLTQWPWQ 253

  Fly  1119 AAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLG-VTRRNSFTYSGQKVKVKA 1182
            .::..  :....|.|.:|:..|::||:|||  |.:...:.||:|:| |:..:|...|.   .|:.
Mouse   254 VSLQF--QGYHLCGGSIITPLWIVTAAHCV--YDLYHPKSWTVQVGLVSLMDSPVPSH---LVEK 311

  Fly  1183 VIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPK 1247
            :|.|.:|... ...|||||.:|:..:.|.|.:.|:|| |.|..|...|.||...|||..||....
Mouse   312 IIYHSKYKPK-RLGNDIALMKLSEPLTFDETIQPICL-PNSEENFPDGKLCWTSGWGATEDGGDA 374

  Fly  1248 STYEYIVNEVQVPIITRNQCDEW-LDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNR 1311
            |.   ::|...||:|:...|:.. :....:|..|:|||:..||.|:|||||||||:|.   |:..
Mouse   375 SP---VLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQ---ERRL 433

  Fly  1312 WFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQIAK 1349
            |.:.|..|:||.||....||||..:..::.||.||:.:
Mouse   434 WKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQLER 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060 3/11 (27%)
LDLa 945..979 CDD:238060 9/33 (27%)
SR 980..>1034 CDD:214555 13/54 (24%)
Tryp_SPc 1104..1346 CDD:238113 87/243 (36%)
Tmprss3NP_001157248.1 LDLa 96..129 CDD:238060 10/41 (24%)
SRCR_2 134..233 CDD:464747 25/117 (21%)
Tryp_SPc 239..468 CDD:238113 87/243 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.