DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and LOC1277692

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_317175.3 Gene:LOC1277692 / 1277692 VectorBaseID:AGAMI1_009859 Length:273 Species:Anopheles gambiae


Alignment Length:275 Identity:77/275 - (28%)
Similarity:129/275 - (46%) Gaps:58/275 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1097 RHKPSR-------------RIIGGTQASPGNWPFLAAILGGPEKI-------FYCAGVLISDQWV 1141
            |||.:|             ||:||         |:..|...|.::       .:|.|.:::.:|:
Mosquito    27 RHKLTRPAFHPNAPYLAGKRIVGG---------FVIDISDAPYQVSLQYNGKHHCGGSILNSKWI 82

  Fly  1142 LTASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLAT 1206
            |||:||:..:|.:..   |:::|.:...:   .|..:.:..::|||.::.: |::.||||.:|.:
Mosquito    83 LTAAHCIDLHSEVKP---TVRVGSSEHAA---GGTVLHLVRIVPHPGHSSS-ANNYDIALLELES 140

  Fly  1207 RVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWL 1271
            .:.|::::.||.||... ..:..||:..|.|||........:.   |:....||.:.:.:|::..
Mosquito   141 EITFNDNVQPVQLPEQD-DPIEEGTMGIVSGWGMTMSAADSNA---ILRATNVPTVNQQECNQAY 201

  Fly  1272 DNL-TVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVG-----GIVSWGIMCAHPRLP 1330
            .:. .::|.|.|||:..||...|:.|||||            ||.     |:|||...||....|
Mosquito   202 QSYGGITEQMFCAGYRQGGTGTCRNDSGGP------------FVAEGKLIGVVSWSHECALAGYP 254

  Fly  1331 GVYANVVQYVPWIQE 1345
            ||||.|.....||:|
Mosquito   255 GVYARVASVREWIRE 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 72/255 (28%)
LOC1277692XP_317175.3 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.