DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and LOC1274290

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_061507660.1 Gene:LOC1274290 / 1274290 VectorBaseID:AGAMI1_000428 Length:306 Species:Anopheles gambiae


Alignment Length:319 Identity:80/319 - (25%)
Similarity:127/319 - (39%) Gaps:80/319 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1074 KTEDYPMADLTCSNYECGRVKRGRHKPSRRIIG----------GTQASPGNWPFLAAILGGPEKI 1128
            :|....:|:..|..|.    |.....|| ::||          |..|..|.:|....:    .:.
Mosquito    20 ETHGLRLAEQKCQEYR----KTIASFPS-KVIGRTNVFDTPPNGLPAREGEFPHQVRV----GQW 75

  Fly  1129 FY-----------CAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQ----KV 1178
            ||           |:|.||||::||.|:||:..     |.|..:.||   |:.:|.:|.    .:
Mosquito    76 FYEDEDDTAFILRCSGALISDRYVLIAAHCLWT-----LGDEEVSLG---RHDYTRNGTFPELSI 132

  Fly  1179 KVKAVIPHPQYN-MAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKRE 1242
            |...:|.||.|: ...|..|||||.:||..|.|..|:.|.||                  |.:.|
Mosquito   133 KRDDLILHPSYDEQTKASYNDIALVRLAQPVTFTSHIYPACL------------------WTEEE 179

  Fly  1243 DKDPKS------TYEYIVNE--------VQVPIITRNQCD-EWLDN----LTVSEGMVCAGFDDG 1288
            ..:|..      |...:||:        :||..:...:|. |:.|:    ..|::.::||.....
Mosquito   180 AAEPTKLTSSGFTMGRLVNDTQDTRLVKIQVSRVPNAECSREYTDSGYYPQGVTDALLCAESPVE 244

  Fly  1289 GKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQI 1347
            .|..|:||:||.|........:.:.:.|:.:.|..|.......::..|.|.:.||:..:
Mosquito   245 WKSLCEGDAGGLLQTLDRDSADVYRLIGVEAKGHECDQSHQKFIFTKVRQQLDWIESVV 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 73/286 (26%)
LOC1274290XP_061507660.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.