DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and LOC1269896

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_308550.4 Gene:LOC1269896 / 1269896 VectorBaseID:AGAMI1_006675 Length:305 Species:Anopheles gambiae


Alignment Length:256 Identity:80/256 - (31%)
Similarity:123/256 - (48%) Gaps:26/256 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1099 KPSRRIIGGTQASPGNWPFLAAILGG-PEKIFYCAGVLISDQWVLTASHCV----GNYSVIDLED 1158
            :.:.||:.|..|.||.:|:..|||.. |.....|.|.:::..:||||:|||    |...:...:|
Mosquito    59 RDNARIVNGYVAQPGQFPYQVAILSTFPTGSGLCGGSVLTANYVLTAAHCVDVSNGGLVIYGAQD 123

  Fly  1159 WTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPS 1223
            .|:.....:|.:|..||.::       ||.:|.|:.. .|||..::.:.|.|.:.:.||.||..|
Mosquito   124 RTVNEPSQQRIAFEQSGVRL-------HPNWNPALIR-YDIATIRVVSPVTFSDRIQPVTLPRLS 180

  Fly  1224 -VRNLHPGTLCTVIGWGKRED--KDPKSTYEYIVNEVQVPIITRNQCDEWLDNLTVSEGMVCAGF 1285
             |.|...|.:.||.|:|:..|  ::..:...|:.|    ||.|...|......:...|.:..:| 
Mosquito   181 DVGNDFAGLIGTVSGFGRFSDSIQEASAILRYVNN----PIQTNLACSVRFPGVVQPENICLSG- 240

  Fly  1286 DDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGI-MCAHPRLPGVYANVVQYVPWIQE 1345
             |.|:.||||||||||.....|...:.   |:||:|: :......|.|:|....::.||.|
Mosquito   241 -DSGRGACQGDSGGPLTIVRDGTTVQL---GVVSFGLALGCELNWPSVFARTTSFLAWIGE 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 79/251 (31%)
LOC1269896XP_308550.4 Tryp_SPc 63..295 CDD:214473 77/248 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.