DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and mfrp

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_009289590.1 Gene:mfrp / 101885305 ZFINID:ZDB-GENE-160728-150 Length:572 Species:Danio rerio


Alignment Length:585 Identity:108/585 - (18%)
Similarity:180/585 - (30%) Gaps:220/585 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 GSSNSSN-SIGETQSQSSKEPSSVSASASTSSAASAGSSTISSGTMSSMSGP-CPAVVPPTD--- 468
            |:..|.| |:..|..|.:..| :||.|.:..:....|.  :.||...::|.| .|.|.||..   
Zfish   104 GNRVSENLSLSPTALQPTYSP-TVSVSGTEPTFTKCGG--MLSGAGGTLSSPNHPGVYPPDSHCV 165

  Fly   469 -AITKRPGPPEPPLRQANVFDPVETGSRGHPPPPLTVRNKLGRNKPPPITYPRMQQRQDSTLSSD 532
             .|...|    |.|.|..|                   :.|....|.|..:..::.|:::..:| 
Zfish   166 WVIRVSP----PSLVQIQV-------------------SSLAIEGPSPCLFDWLEVREETEKTS- 206

  Fly   533 SYSISSSPGYNSKLMEAPLLGSQQGGRKSNAPGSAQRQTPLMDLAPTRFLGGAGGGTGSGKQGPA 597
                                                        |.|||.|.....|.:......
Zfish   207 --------------------------------------------AATRFCGNVAPPTLNTNSSTV 227

  Fly   598 MPPPRSKINFRQDSTISSDSF-SQTSSPGYNPKLMEAPLLPSLSAKRLCSAPAPIVCRQGVQHEP 661
            :      ::|..|.:|....| :|..|           :||   .:|.||. ...:|..|     
Zfish   228 L------VSFHSDGSIGGTGFIAQYHS-----------ILP---GQRSCSR-EEFMCDSG----- 266

  Fly   662 IEELEPPQTISPLHKAAGQPSSLQTIVRFQNGAPHTMSL----QHQI-----------INRRKSS 711
                   ..:.|:....|||          |...|:..|    :|::           ::.....
Zfish   267 -------HCLLPVFICDGQP----------NCQDHSDELNCSHKHRVCGGQITGEYGSLSSPNHP 314

  Fly   712 NPY-----------ITNG---RLKFRLFQI--------------------------------LIN 730
            .||           :.:|   ||.|:.|.:                                |.:
Zfish   315 KPYPHQQMCTWQISVEDGQVIRLSFQNFSLEAQDVCKFDYVEVYDGAETALGRYCGSALPPDLTS 379

  Fly   731 AFALLAIA----GGLA--AYFNAYPTIKFVNKTII---------NTIHVEDTTSFGKN------- 773
            :..:|.:.    .|:|  .::.::..|....:|..         ..:| :|....|.:       
Zfish   380 SGPVLTVVFVADEGVADSGFYASFQAISLSERTCSPAQFACPTGECLH-QDWLCDGWSDCADGAD 443

  Fly   774 ----------PAPGTCLPIIVRFCQGPQIPYNYTVFPN-YIGHFGQLETQTDLDSYEALVDVRCY 827
                      |...:|..|.|..|:  .:.||.|.||| ::....|.|..:.|..|..|||:.|:
Zfish   444 EHHCMNSTYPPFTSSCELIQVEMCR--DLSYNLTSFPNIWLSLSDQREAASILHKYRVLVDLPCF 506

  Fly   828 ELVSLFLCTLFVPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDC 892
            |.....:|.:|:|:|......:..|:::|:....:|.....:|.|:.|  .||.|..|.....:|
Zfish   507 ESFRQLVCGMFLPRCSPQSGVLQLCQSVCSTAELQCSPALSLFSLNWP--FNCLLLPDSHDPMEC 569

  Fly   893  892
            Zfish   570  569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 34/116 (29%)
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
SRCR 992..1086 CDD:278931
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
mfrpXP_009289590.1 CUB 138..248 CDD:238001 31/185 (17%)
LDLa 256..290 CDD:238060 11/56 (20%)
CUB 297..405 CDD:238001 11/107 (10%)
LDLa 413..447 CDD:238060 3/34 (9%)
Fz 459..563 CDD:279700 32/107 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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