DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and gzma

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_012808240.1 Gene:gzma / 100135014 XenbaseID:XB-GENE-482759 Length:267 Species:Xenopus tropicalis


Alignment Length:252 Identity:83/252 - (32%)
Similarity:125/252 - (49%) Gaps:35/252 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1104 IIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRR 1168
            ||.|.:|:..:.|::|.|.   .:...|.|.||...|||||:|||.|.|       .:.||..:.
 Frog    35 IIDGREAASHSRPYMAYIY---SRTGSCGGTLIKQNWVLTAAHCVVNNS-------EVILGAHKV 89

  Fly  1169 NSFTYSGQKVKVKAVIPHP--QYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGT 1231
            .|.....|:..|...||||  ::...|   :||.|.|:......::.:..:.||...: ::.||:
 Frog    90 KSRENEQQRFSVARAIPHPCFEWKKKI---HDIQLLQIKGAAKLNKFVSVLKLPTTDM-DVKPGS 150

  Fly  1232 LCTVIGWG--KREDKDPKSTYEYIVNEVQVPIITRNQCDEWLDNL--TVSEGMVCAGF---DDGG 1289
            .|:..|||  |...|.|..    ::.||.|.::.|..|::.....  .:|..|:|||.   .|..
 Frog   151 SCSTAGWGVTKPNGKTPSD----VLREVNVTVVDRGTCNKIYKKFKTEISTNMLCAGAPKKSDKK 211

  Fly  1290 KDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANV-VQYVPWIQE 1345
            .|||||||||||:|   |::    ..||||:|..|..|:.||:|..: .:|:.||::
 Frog   212 YDACQGDSGGPLIC---GKE----FSGIVSFGKKCGDPKYPGIYTRLTARYLQWIRD 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 83/252 (33%)
gzmaXP_012808240.1 Tryp_SPc 35..262 CDD:238113 83/252 (33%)
Blue background indicates that the domain is not in the aligned region.

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