DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and zgc:165423

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_005164170.1 Gene:zgc:165423 / 100101646 ZFINID:ZDB-GENE-070720-11 Length:538 Species:Danio rerio


Alignment Length:314 Identity:107/314 - (34%)
Similarity:157/314 - (50%) Gaps:40/314 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1055 WKMYAKRKSTLMQEFANCKKTEDYPMADLTCSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFLA 1119
            ||:......||:....:|:.|:..|         .||:...     :.:|:|||.||.|:||:.|
Zfish     3 WKLSLLCVVTLLSTGCDCQPTQSPP---------ACGKAPL-----NTKIVGGTNASAGSWPWQA 53

  Fly  1120 AILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVI 1184
            ::  ......:|.|.||||||:|:|:||..  |..:..|:|:.||...::....:.....|..||
Zfish    54 SL--HESGSHFCGGSLISDQWILSAAHCFP--SNPNPSDYTVYLGRQSQDLPNPNEVSKSVSQVI 114

  Fly  1185 PHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKRED----KD 1245
            .||.| ....||||:||..|::.|.|..::.||||.... ...:..|: .:.|||..|.    ..
Zfish   115 VHPLY-QGSTHDNDMALLHLSSPVTFSNYIQPVCLAADG-STFYNDTM-WITGWGTIESGVSLPS 176

  Fly  1246 PKSTYEYIVNEVQVPIITRNQCD-EWLDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEK 1309
            |:     |:.||.|||:..|.|: .:....:::..|:|||...||||:||||||||::..   ..
Zfish   177 PQ-----ILQEVNVPIVGNNLCNCLYGGGSSITNNMMCAGLMQGGKDSCQGDSGGPMVIK---SF 233

  Fly  1310 NRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQIAKH------SRPIKED 1357
            |.|...|:||:|..||.|..|||||.|.||..||.:.:...      :.||::|
Zfish   234 NTWVQAGVVSFGKGCADPNYPGVYARVSQYQNWISQYVRASFIPVDVNAPIQDD 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
SRCR 992..1086 CDD:278931 7/30 (23%)
Tryp_SPc 1103..1343 CDD:214473 93/244 (38%)
Tryp_SPc 1104..1346 CDD:238113 95/246 (39%)
zgc:165423XP_005164170.1 Tryp_SPc 37..267 CDD:214473 93/244 (38%)
Tryp_SPc 38..269 CDD:238113 95/245 (39%)
Tryp_SPc 299..473 CDD:304450
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24253
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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