DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and si:dkey-16l2.17

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_001341498.1 Gene:si:dkey-16l2.17 / 100001520 ZFINID:ZDB-GENE-141212-262 Length:305 Species:Danio rerio


Alignment Length:277 Identity:100/277 - (36%)
Similarity:145/277 - (52%) Gaps:32/277 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1084 TCSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCV 1148
            ||....|||...|     :||:||.:||||:||:...|..|... ..|.|.:|:..|||:|:||.
Zfish    17 TCLAQVCGRPPLG-----KRIVGGVEASPGSWPWQVDIQMGSNG-HVCGGSIIAKNWVLSAAHCF 75

  Fly  1149 GNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKV--KAVIPH----PQYNMAIAHDNDIALFQLATR 1207
            .|.|  ::..:|:.:|....|.:. ..:||..  :.|||.    ||      ...|:||.||...
Zfish    76 PNPS--EVSAYTLYMGRHLLNGYN-QFEKVSYVQRVVIPEGYTDPQ------GGRDVALVQLRAP 131

  Fly  1208 VAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWL- 1271
            |::.:.:.|||||....: .:.||||.|.|||.::: ....|....:.||:||||.::.|.... 
Zfish   132 VSWTDRIQPVCLPFADFQ-FNSGTLCYVTGWGHKQE-GVSLTGAAALREVEVPIIDQSSCQFMYQ 194

  Fly  1272 ----DNLTVS--EGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLP 1330
                |:.||.  ..|:|||:.:||||:|||||||||:||.  ....|...|:||:|:.||....|
Zfish   195 ILSSDSSTVDILSDMICAGYKEGGKDSCQGDSGGPLVCPV--GNGTWIQAGVVSFGLGCAQKNRP 257

  Fly  1331 GVYANVVQYVPWIQEQI 1347
            |:|:.|..:...|:..:
Zfish   258 GIYSRVSSFEKLIRTTV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 93/254 (37%)
si:dkey-16l2.17XP_001341498.1 Tryp_SPc 32..273 CDD:238113 93/254 (37%)
Blue background indicates that the domain is not in the aligned region.

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