DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gpo2 and gpd2

DIOPT Version :10

Sequence 1:NP_610295.1 Gene:Gpo2 / 35689 FlyBaseID:FBgn0033190 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_001107700.1 Gene:gpd2 / 779615 XenbaseID:XB-GENE-1011134 Length:725 Species:Xenopus tropicalis


Alignment Length:741 Identity:316/741 - (42%)
Similarity:475/741 - (64%) Gaps:57/741 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VMLGSSKLGHGA----FGF----DERQADSTPV-------PQMKRELPTRKMCLEAFKRT-HYDI 57
            |:.|:..:|.||    ||.    |:|:|..|.|       ...:.|||:|:..|...::| .:|:
 Frog     6 VVRGTLLIGGGAVATVFGLSHLTDKRKASITSVEAAELIKSSTQNELPSREAQLLTLQKTKEFDV 70

  Fly    58 LIIGGGAVGSGCALDAATRGLKTALVEANDFGSGTSSKSSKLLHGGLRDLEQAISRLDVAAFRRV 122
            |:|||||.|.||||||.:|||||||||.:||.|||||:|:||:|||:|.|::||...|:..::.|
 Frog    71 LVIGGGATGCGCALDAVSRGLKTALVERDDFSSGTSSRSTKLIHGGVRYLQKAIMNFDIEQYKLV 135

  Fly   123 RCSLQERSHIGKLAPHLSQPVPILLPVHHWWQAPLYYMKLKIYHLMA-PKATRSFQYLSADDALE 186
            :.:|.||:::.::|||||.|:||:|||:.|||.|.|::.:|.|.|:| .:..||...||...|||
 Frog   136 KEALHERANLLEIAPHLSAPLPIMLPVYKWWQLPYYWVGIKAYDLVAGSQCLRSSYILSKSKALE 200

  Fly   187 VFPMLRRQELFGAFVFYEGQHDDARMCLSVALTAARYGADICNHMKVSRLIKNKD-----GNVAG 246
            :||||::.:|.||.|:|:|||:||||.|::|||||||||...|:.:|.||::..|     ..|.|
 Frog   201 LFPMLQKDKLVGAIVYYDGQHNDARMNLAIALTAARYGAATANYTEVVRLLRRTDPESGKERVCG 265

  Fly   247 AEAVDQLTGKKYSIRAKVVVNATGHMSDSLRQMEDSEAKPLCTRSWSSIIVMPRFYCPEEVGVFD 311
            |...|.|||:::.:|||.|:||||..:||:|:|::.|.|.:|..|....||||.:|.|:.:|:.|
 Frog   266 ARCRDVLTGQEFDVRAKCVINATGPFTDSVRRMDNQEVKNICQPSAGVHIVMPGYYSPDNMGLLD 330

  Fly   312 PHTPSGRSIFFLPWQGHTLVGSSDEPLNLPEQDTQPTETDVQSLLDCVKHFVTPNFDVRRCDVLA 376
            |.|..||.||||||:..|:.|::|.|..:..... |||.|:..:|..|:::::.:.:|||.||||
 Frog   331 PATSDGRVIFFLPWEKMTIAGTTDTPTEVTHHPI-PTEDDINFILTEVRNYLSSDVEVRRGDVLA 394

  Fly   377 VWGGYKPL---PVQSDTLHHTRFKNHVIQLGPRNMLSIVGGTWSSFRVLAEKTVNAAIRYGDLSP 438
            .|.|.:||   |...||...:|  |||:.:|...:::|.||.|:::|.:||.|::|||:..:|. 
 Frog   395 AWSGIRPLVTNPNSKDTQSISR--NHVVDVGESGLVTIAGGKWTTYRSMAEDTLDAAIKAHNLK- 456

  Fly   439 LRKESVTAESCK-----LDGASGWSPKMFIRLVQDFGMERDVAEHLSNTYGSNAFKVAVSADSSG 498
                   |..|:     |:|...|||.::||||||:|:|.:||:||:.|||..||:||..|..:|
 Frog   457 -------AGPCRTVGLFLEGGKDWSPTLYIRLVQDYGLESEVAQHLAATYGDQAFEVAKLAKVTG 514

  Fly   499 KAWPIVGKRLHSEFPYIEAEVKQGVRDFACTLEDMVARRLRVAFLNVQVAEEILPQVANIMAKEL 563
            |.||||||||.|||||||||:|..:|::|||..|:::||.|:.|||||.|||.||::.:||||||
 Frog   515 KRWPIVGKRLVSEFPYIEAEIKYALREYACTAVDVISRRTRLGFLNVQAAEEALPRIVDIMAKEL 579

  Fly   564 NWSRDQIKKQIRQTRTFLNSQMG------QLTKESASQMSIPIKMSVRQVRKFAGQFRQMDDNNT 622
            ||...:.|:::...:.||..:||      |||..|      .|.:|...|.::..:|.:.|.:..
 Frog   580 NWKEQKKKEELEAAKNFL
YYEMGYKSRSEQLTDRS------EINLSPSDVDRYTKRFHKFDKDKK 638

  Fly   623 GYVSIADCCKAMKTMGVKEVPVDLMHDVLRDIDVHAQGKVNLYEFLLLMSAIVQGNTEYLRYARL 687
            |:::|.|..:.::.:.| ::..:.:|::|.::|::..|:|.|.|||.|||||.:|   ::..:||
 Frog   639 GFITILDVQRVLENVNV-QMDANNLHEILNEVDLNKNGQVELNEFLQLMSAIQKG---FVSSSRL 699

  Fly   688 YLDHKRQMQGSNFPTVMQMERAGGGL 713
            .:..|...:..:....:.:.|:|||:
 Frog   700 AILMKSAEENLDQRDPIPVHRSGGGV 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpo2NP_610295.1 DAO 8..583 CDD:477422 279/603 (46%)
EF-hand_7 614..672 CDD:463900 16/57 (28%)
gpd2NP_001107700.1 DAO 1..597 CDD:477422 277/601 (46%)
EFh 628..687 CDD:238008 16/59 (27%)

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