DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gpo2 and gut2

DIOPT Version :10

Sequence 1:NP_610295.1 Gene:Gpo2 / 35689 FlyBaseID:FBgn0033190 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_588348.1 Gene:gut2 / 2539217 PomBaseID:SPCC1223.03C Length:649 Species:Schizosaccharomyces pombe


Alignment Length:632 Identity:213/632 - (33%)
Similarity:340/632 - (53%) Gaps:61/632 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 AVMLGSSKLGHGAF--GFDERQADS------TPVPQMKRELPTRKMCLEAFKR-THYDILIIGGG 63
            |.:..|..:|...|  .|.:|.|.|      ||..:.....|:|:..|:..:. :.:|:||||||
pombe    12 AALAASGLVGGAVFYSDFIKRPAPSHFNPQFTPFTKSLAPPPSRETLLKNVEDISKFDVLIIGGG 76

  Fly    64 AVGSGCALDAATRGLKTALVEANDFGSGTSSKSSKLLHGGLRDLEQAISRLDVAAFRRVRCSLQE 128
            |.|:|.|:||:||||...|:|..||.|.|||||:|:.|||:|.||:|:.:|..|....|..:|.|
pombe    77 ATGTGVAVDASTRGLNVCLLEKTDFASETSSKSTKMAHGGVRYLEKAVFQLSKAQLDLVIEALNE 141

  Fly   129 RSHIGKLAPHLSQPVPILLPVHHWWQAPLYYMKLKIYHLMA-PKATRSFQYLSADDALEVFPMLR 192
            |:::.:.||||...:||::||:.|||.|.:::..|||..:| .|..|:....|.:..:.:.|||.
pombe   142 RANMLRTAPHLCTVLPIMIPVYKWWQVPYFFVGCKIYDWVAGSKNLRASTIFSKETTVAIAPMLD 206

  Fly   193 RQELFGAFVFYEGQHDDARMCLSVALTAARYGADICNHMKVSRLIKNKDGNVAGAEAVDQLTGKK 257
            ...|..:.|:::|..:|.||..::|:||...||.:.|:|:|.:|:|:||..:.|..|:|:.|||:
pombe   207 DSNLKASCVYHDGSFNDTRMNTTLAVTAIDNGATVLNYMEVKKLLKSKDNKLEGVLAIDRETGKE 271

  Fly   258 YSIRAKVVVNATGHMSDSLRQME-DSEAKPLCTRSWSSI--------IVMPRFYCPEEVGVFDPH 313
            |.|:|..||||||..||.:.:|: |.:.:|..|..:..:        :|:|.:|||..:|:.||.
pombe   272 YQIKATSVVNATGPFSDKILEMDADPQGEPPKTAQFPRMVVPSAGVHVVLPEYYCPPNIGILDPS 336

  Fly   314 TPSGRSIFFLPWQGHTLVGSSDEPLNLPEQDTQPTETDVQSLLDCVKHFVTPNFDVRRCDVLAVW 378
            |...|.:|||||||..:.|::|:||:....:..|:|.|:|.:|..::.::.  |.|.|.|||:.|
pombe   337 TSDNRVMFFLPWQGKVIAGTTDKPLSSVPTNPTPSEDDIQLILKELQKYLV--FPVDREDVLSAW 399

  Fly   379 GGYKPL--------PVQSDTLHHTR--FKNHVIQLGPRNMLSIVGGTWSSFRVLAEKTVNAAIRY 433
            .|.:||        |....|...|:  .::|.|......:|:|.||.|:::|.:||:|||..|:.
pombe   400 CGIRPLVRDPSTVPPGTDPTTGETQGLVRSHFIFKSDTGLLTISGGKWTTYREMAEETVNELIKD 464

  Fly   434 GDLSPLRKESVTAESCKLDGASGWSPKMFIRLVQDFGMERDVAEHLSNTYGSNAFKV-------- 490
            .|.....|...| :...|.|...:......||:.::.:...:|:|||:.|||.|..:        
pombe   465 HDFGKALKPCQT-KKLILVGGENYYKNYSARLIHEYHIPLRLAKHLSHNYGSRAPLILELYSKTD 528

  Fly   491 --------------AVSAD-SSGKAWPIVGKRLHSEFPYIEAEVKQGVR-DFACTLEDMVARRLR 539
                          |.|:| ||.|:   |......| |:..||:|..:: ::..|..|.:|||.|
pombe   529 FNKLPVTLADKEVFAPSSDASSDKS---VSYASFDE-PFTVAELKYSIKYEYTRTPTDFLARRTR 589

  Fly   540 VAFLNVQVAEEILPQVANIMAKELNWSRDQIKKQIRQTRTFLNSQMG 586
            :|||:.:.|.:.:..|.::|.:|..|......|..::.|.::.. ||
pombe   590 LAFLDARQALQAVAGVTHVMKEEFGWDDATTDKLAQEARDYIGG-MG 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpo2NP_610295.1 DAO 8..583 CDD:477422 211/627 (34%)
EF-hand_7 614..672 CDD:463900
gut2NP_588348.1 DAO 8..631 CDD:477422 211/625 (34%)
Blue background indicates that the domain is not in the aligned region.

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