DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gpo2 and Gpd2

DIOPT Version :10

Sequence 1:NP_610295.1 Gene:Gpo2 / 35689 FlyBaseID:FBgn0033190 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_036868.1 Gene:Gpd2 / 25062 RGDID:2726 Length:727 Species:Rattus norvegicus


Alignment Length:729 Identity:310/729 - (42%)
Similarity:469/729 - (64%) Gaps:41/729 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MAVMLGSSKLGHGAFGFDERQAD----------STPVPQMKRELPTRKMCLEAFKRT-HYDILII 60
            :|.:||.|:..|    :..:|..          |.||   .||.|:|:..|...:.| .:|||:|
  Rat    18 LATVLGLSQFAH----YRRKQVSLAYVEAATCFSEPV---NREPPSREAQLMTLQNTSEFDILVI 75

  Fly    61 GGGAVGSGCALDAATRGLKTALVEANDFGSGTSSKSSKLLHGGLRDLEQAISRLDVAAFRRVRCS 125
            ||||.|.||||||.||||||||||.|||.|||||:|:||:|||:|.|::||:.|||..:|.|:.:
  Rat    76 GGGATGCGCALDAVTRGLKTALVERNDFASGTSSRSTKLIHGGVRYLQKAITNLDVEQYRMVKEA 140

  Fly   126 LQERSHIGKLAPHLSQPVPILLPVHHWWQAPLYYMKLKIYHLMA-PKATRSFQYLSADDALEVFP 189
            |.||:::.::|||||.|:||:||::.|||.|.|::.:|:|.|:| ....:|...||...|||.||
  Rat   141 LHERANLLEIAPHLSAPLPIMLPLYKWWQLPYYWVGIKMYDLVAGSHCLKSSYVLSKSRALEHFP 205

  Fly   190 MLRRQELFGAFVFYEGQHDDARMCLSVALTAARYGADICNHMKVSRLIKNKD-----GNVAGAEA 249
            ||::.:|.||.|:|:|||:||||.|::|||||||||...|:|:|..|:|..|     ..|:||..
  Rat   206 MLQKDKLVGAIVYYDGQHNDARMNLAIALTAARYGAATANYMEVVSLLKKTDPETGKERVSGARC 270

  Fly   250 VDQLTGKKYSIRAKVVVNATGHMSDSLRQMEDSEAKPLCTRSWSSIIVMPRFYCPEEVGVFDPHT 314
            .|.|||.::::|||.|:||||..:||:|:|:|::..|:|..|....||||.:|.||.:|:.||.|
  Rat   271 KDVLTGHEFNVRAKCVINATGPFTDSVRKMDDNDVVPICQPSAGVHIVMPGYYSPENMGLLDPAT 335

  Fly   315 PSGRSIFFLPWQGHTLVGSSDEPLNLPEQDTQPTETDVQSLLDCVKHFVTPNFDVRRCDVLAVWG 379
            ..||.||||||:..|:.|::|.|.::..... |:|.|:..:|:.|:::::.:.:|||.||||.|.
  Rat   336 SDGRVIFFLPWEKMTIAGTTDSPTDVTHHPI-PSEDDINFILNEVRNYLSCDVEVRRGDVLAAWS 399

  Fly   380 GYKPL---PVQSDTLHHTRFKNHVIQLGPRNMLSIVGGTWSSFRVLAEKTVNAAIRYGDLS--PL 439
            |.:||   |..::|...:|  |||:::....:::|.||.|:::|.:||.|||.|::..:|:  |.
  Rat   400 GIRPLVTDPKSANTQSISR--NHVVEVSDSGLITIAGGKWTTYRSMAEDTVNKAVKLHNLNAGPS 462

  Fly   440 RKESVTAESCKLDGASGWSPKMFIRLVQDFGMERDVAEHLSNTYGSNAFKVAVSADSSGKAWPIV 504
            |...:.     |.|...|||.::||||||:|:|.:||:||:.|||..||.||..|..:||.||:|
  Rat   463 RTVGLF-----LQGGKDWSPTLYIRLVQDYGLESEVAQHLAKTYGDKAFDVAKMASVTGKRWPVV 522

  Fly   505 GKRLHSEFPYIEAEVKQGVRDFACTLEDMVARRLRVAFLNVQVAEEILPQVANIMAKELNWSRDQ 569
            |.||.|||||||||||.|::::|||..||::||.|:||||||.|||.||::..:|.:|||||..:
  Rat   523 GVRLVSEFPYIEAEVKYGIKEYACTAVDMISRRTRLAFLNVQAAEEALPKIVELMGRELNWSELR 587

  Fly   570 IKKQIRQTRTFLNSQMGQLTKESASQMSIPIKMSVRQVRKFAGQFRQMDDNNTGYVSIADCCKAM 634
            .::::.....||..:||..::......|..|.:....:.::..:|...|::..|:::|.|..:.:
  Rat   588 KQEELETATRFLYYEMGYKSRTEQLTDSTEISLLPPDIDRYKKRFHMFDEDEKGFITIVDVQRVL 652

  Fly   635 KTMGVKEVPVDLMHDVLRDIDVHAQGKVNLYEFLLLMSAIVQGNTEYLRYARLYLDHKRQMQGSN 699
            :::.| ::..|.:|::|.::|::..|:|.|:|||.||||:..|.....|.|.|.   |...:..:
  Rat   653 ESINV-QMDEDTLHEILCEVDLNKNGQVELHEFLQLMSAVHTGRVSGSRLAILM---KTAEENLD 713

  Fly   700 FPTVMQMERAGGGL 713
            ....:.::|:.|||
  Rat   714 RRVPIPVDRSCGGL 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpo2NP_610295.1 DAO 8..583 CDD:477422 277/596 (46%)
EF-hand_7 614..672 CDD:463900 17/57 (30%)
Gpd2NP_036868.1 DAO 1..599 CDD:477422 275/595 (46%)
EFh 627..689 CDD:238008 17/62 (27%)

Return to query results.
Submit another query.