DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyt-b5 and Cyb5d1

DIOPT Version :9

Sequence 1:NP_610294.1 Gene:Cyt-b5 / 35688 FlyBaseID:FBgn0264294 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001178819.1 Gene:Cyb5d1 / 363629 RGDID:1559567 Length:228 Species:Rattus norvegicus


Alignment Length:55 Identity:18/55 - (32%)
Similarity:32/55 - (58%) Gaps:2/55 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FTRAEVAKHNTNKDTWLLIHNNIYDVTAFLNEHPGG--EEVLIEQAGKDATENFE 61
            ||.:|||:||..:|.|:.....:|::|..:.|..|.  .:.::|.||:|.:..|:
  Rat    20 FTPSEVAEHNQPEDLWVSYLGFVYNLTPLVQEFKGDLLLKPILEVAGQDISHWFD 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-b5NP_610294.1 Cyt-b5 8..81 CDD:278597 18/55 (33%)
Cyb5d1NP_001178819.1 Cyt-b5 19..>73 CDD:278597 17/52 (33%)
UBQ 143..199 CDD:214563
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5274
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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