DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drat and CG4836

DIOPT Version :9

Sequence 1:NP_610293.3 Gene:Drat / 35687 FlyBaseID:FBgn0033188 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_001138085.1 Gene:CG4836 / 42387 FlyBaseID:FBgn0270925 Length:1224 Species:Drosophila melanogaster


Alignment Length:400 Identity:81/400 - (20%)
Similarity:131/400 - (32%) Gaps:151/400 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 CAGAC-------------YRRRDRANSITSMSSV------------------SSE---------- 118
            |.|.|             .::.||..::.:.||:                  |||          
  Fly   821 CTGKCAKVKFPKKKCDRKKKKDDRIGNLLTRSSIAQLQPQRRSFSTRPCCHPSSEKRTADDEALT 885

  Fly   119 ---LSDYCPSVNSMSSPAHQG----IREGS--------------------FFPGFEVAGVIESLG 156
               .:.|..||...|.|..:.    ||.||                    ...|.:..|::|.||
  Fly   886 LRITNPYEISVVPFSKPRPKDFDVLIRTGSVAVSNSDIHVYENGNRDMEAMSLGHDATGIVEELG 950

  Fly   157 SEITEANNRGLRIGQRVI------------------------VY-----PFDETPAGYAELLVVP 192
            ..:     :.|.:|.||:                        ||     .:...||         
  Fly   951 RCV-----QHLHVGDRVVMESALSCGICDLCKKGLYNMCSGLVYNGFLSTYQTHPA--------- 1001

  Fly   193 DLKHVVPIPDSLPMEVAAMLPTGALLAWNAVFKAQAVVT-QILSQRAATEPKRKPKILIVGTGGL 256
            ||.|  .:|:|:.||..|:..|.| |...|.|||....| .:|...|.      |..:..|....
  Fly  1002 DLCH--RLPESISMEAGALTQTLA-LGCQACFKANVTPTSNVLILGAC------PTAVAAGICAK 1057

  Fly   257 ALWAVRIASYHFATTGADNVDITVASLRDEGFRLATEIKNVSVVQWNECLYEPQLIERTKDVCGG 321
            |:.|.|:|   .|...|..:|:..   ||.||:......|....:..|.:|     .:.:|    
  Fly  1058 AIGAKRVA---IAGCMAPALDVVA---RDFGFQAVEFDSNALFGEVLEAIY-----SKFRD---- 1107

  Fly   322 AVDVVIDFGTTSRSLHRSMHCLSKGGVVLISDEVAE--------------KLLPKFSRLSEQYQQ 372
            ..|.||:...::.:::.::..|...||.::::..:|              :|:|.| |.:..|..
  Fly  1108 WPDCVINCSISAMTMNLAVMALQPCGVCVLAECDSECASFNALDVLMKNIRLVPSF-RSANMYPT 1171

  Fly   373 EIIAISNGTA 382
            .:..:.:|.|
  Fly  1172 ALQLMQSGRA 1181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DratNP_610293.3 Qor 142..430 CDD:223677 61/284 (21%)
MDR 144..428 CDD:302572 61/282 (22%)
CG4836NP_001138085.1 MDR 888..1218 CDD:302572 70/332 (21%)
Tdh 893..1217 CDD:223991 69/327 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445855
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.