DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drat and Adh6

DIOPT Version :9

Sequence 1:NP_610293.3 Gene:Drat / 35687 FlyBaseID:FBgn0033188 Length:434 Species:Drosophila melanogaster
Sequence 2:XP_006233434.1 Gene:Adh6 / 310903 RGDID:1306313 Length:413 Species:Rattus norvegicus


Alignment Length:434 Identity:83/434 - (19%)
Similarity:142/434 - (32%) Gaps:135/434 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 HNMNKLCRQVSIESPG-----------PGAKNCVFNFFVPIEDTP--ALGARIRIVCAGACYRRR 103
            || ..|.|::....||           |||...:    ..||..|  |...||::|..|.|    
  Rat    29 HN-KMLIREMIKMEPGVIRCKATVLWKPGAPLAI----EEIEVAPPKAKEVRIKMVATGVC---- 84

  Fly   104 DRANSITSMSSVSSELSDYCPSVNSMSSPAHQGIREGSFFPGFEVAGVIESLGSEITEANNRGLR 168
              ...|..:.  :.|||.:||.:     ..|:|:            |::||:|..::     .:|
  Rat    85 --GTDIKHLD--TQELSKFCPMI-----MGHEGV------------GIVESVGEGVS-----SVR 123

  Fly   169 IGQRVIVYPFDE---------------------------------TPAG-----------YAELL 189
            .|.:||:....:                                 |..|           ::|..
  Rat   124 TGDKVILLCIPQCGECKTCLNSKNNICTEIRLSKTHLASEGTSRITCKGKLVHQYIALGSFSEYT 188

  Fly   190 VVPDLKHVVPIPDSLPMEVAAMLPTGALLAWNAVFKAQAVVTQILSQRAATEPKRKPKILIVGTG 254
            |:.::. |..|.:..|:|...::..|....:.|...:..|..      .:|       ..:.|.|
  Rat   189 VLKEIS-VAKIDEGAPLEKVCIIGCGFATGYGAAINSAKVTP------GST-------CAVFGLG 239

  Fly   255 GLALWAVRIASYHFATTGADNVDITVASLRDEGFRLATEIKNVSVVQWNECLYEPQLIERTKDVC 319
            |:.|      |.......|....|....:..:.|..|..:.....|...:  :|..:.|...|:.
  Rat   240 GVGL------SVIIGCKAAGAARIIAVDINKDRFAKAKTVGATDCVDPRD--FEKPIEEVLSDMI 296

  Fly   320 GGAVDVVID-------FGTTSRSLHRSMH--CLSKGGVVLISDEVAEKLLPKFS-RLSEQYQQEI 374
            .|.||...:       .|....|.|:. |  |::.|.:...:..::.:....|| |:.:.     
  Rat   297 DGGVDFCFEVTGNTEAVGAALGSCHKD-HGVCVTVGALASFTSTLSIRSHLFFSGRILKG----- 355

  Fly   375 IAISNG--TAEQLAELVELVANKK--IEPPPHSVFPCEQAAEVI 414
             :|..|  |.|::.:||.....||  |:|.........:|.|.:
  Rat   356 -SILGGWKTKEEIPKLVSDYMAKKFNIDPLITHTLTLSEANEAV 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DratNP_610293.3 Qor 142..430 CDD:223677 57/331 (17%)
MDR 144..428 CDD:302572 57/329 (17%)
Adh6XP_006233434.1 alcohol_DH_class_I_II_IV 44..413 CDD:176259 77/418 (18%)
FrmA 45..411 CDD:223990 77/417 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338826
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.