DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drat and Rtn4ip1

DIOPT Version :9

Sequence 1:NP_610293.3 Gene:Drat / 35687 FlyBaseID:FBgn0033188 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_001101114.1 Gene:Rtn4ip1 / 309912 RGDID:1563384 Length:396 Species:Rattus norvegicus


Alignment Length:454 Identity:94/454 - (20%)
Similarity:149/454 - (32%) Gaps:161/454 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KNCVFNFFVPIEDTPALGARIRIVCAGACYRRRD-------RANSITSMSSV-----------SS 117
            |.||..               |..||..|:.||.       |..|.||..|.           .:
  Rat     5 KTCVLR---------------RNACAAVCFWRRKVITRPPYRGISTTSARSTVMPAWVIDKYGKN 54

  Fly   118 EL-----------------------------------SDY-CPSVNSMSSPAHQGIREGSFFP-- 144
            |:                                   |.| ..::|....|.|...: |..||  
  Rat    55 EVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTK-GEEFPLT 118

  Fly   145 -GFEVAGVIESLGSEITEANNRGLRIGQRV--IVYPFDETPAGYAELLVVPDLKHVVPIPDSLPM 206
             |.:|:||:...|.::     |..:.|..|  .|.|:.:   |.....||.....|...|.||..
  Rat   119 LGRDVSGVVMECGLDV-----RYFQPGDEVWAAVPPWKQ---GTLSEFVVVSGNEVSHKPKSLTH 175

  Fly   207 EVAAMLPTGALLAWNAVFKAQAV-VTQILSQRAATEPKRKPKILIVG-TGGLALWAVRI------ 263
            ..||.||..||.||:|:.|...: ....:.:||          ||:| :||:..:|:::      
  Rat   176 TQAASLPYVALTAWSAINKVGGLNAKNCMGKRA----------LILGASGGVGTFAIQVMKAWGA 230

  Fly   264 ---------ASYHFATTGADNV-DITVASLRDE-------GFRL-----ATEIKNVSVV-QWNEC 305
                     ||......|||.| |.|:.|:.::       .|.|     :||...::.: :|:..
  Rat   231 HVTAVCSKDASELVRKLGADEVIDYTMGSVEEQLKSLKLFDFILDNVGGSTETWALNFLKKWSGA 295

  Fly   306 LY----EPQLIERTK-DVCGGAVDVVIDFGTTS-RSLHRSMHCLSKGGVVLISDEVAEKLLPKFS 364
            .|    .|.|:...: .:..|.:...:..||.: :.|.:.:|                       
  Rat   296 TYVTLVTPFLLNMDRLGIADGMLQTGVTVGTKALKHLWQGVH----------------------- 337

  Fly   365 RLSEQYQQEIIAISNGTAEQLAELVELVANKKIEPPPHSVFPCEQAAEVIAKLCNSEIPGRAIL 428
                 |:......|....:::||||:   ..||.|.....||..:..|...|:......|:.::
  Rat   338 -----YRWAFFMASGPYLDEIAELVD---GGKIRPVIERTFPFSEVPEAFLKVERGHARGKTVV 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DratNP_610293.3 Qor 142..430 CDD:223677 73/329 (22%)
MDR 144..428 CDD:302572 72/325 (22%)
Rtn4ip1NP_001101114.1 Qor 43..395 CDD:223677 80/401 (20%)
RTN4I1 43..394 CDD:176210 80/401 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0604
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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