DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drat and sodh-1

DIOPT Version :9

Sequence 1:NP_610293.3 Gene:Drat / 35687 FlyBaseID:FBgn0033188 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_505991.1 Gene:sodh-1 / 179627 WormBaseID:WBGene00010790 Length:349 Species:Caenorhabditis elegans


Alignment Length:406 Identity:72/406 - (17%)
Similarity:135/406 - (33%) Gaps:116/406 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RQVSIESPGPGAKNCVFNFFVPIEDTPALGARIRIVCAGACYRRRDRANSITSMSSVSSELSD-- 121
            |||.:.||.               |...|   ::|..:|.|:         :.:.....:|.|  
 Worm    24 RQVPVPSPA---------------DDEIL---VKIEYSGICH---------SDLHVWLGDLKDMS 61

  Fly   122 YCPSVNSMSSPAHQGIREGSFFPGFEVAGVIESLGSEITEANNRGLRIGQRVIV----------- 175
            .||.|.                 |.|.||.:..:|..:|     |.::|.:..|           
 Worm    62 VCPLVG-----------------GHEGAGSVVQIGKNVT-----GWQLGDKAGVKLMNFNCLNCE 104

  Fly   176 ---------------YPFDETPAGYAELLVVPDLKHVVPIPDSLPMEVAAMLPTGALLAWNAVFK 225
                           |.||.: ..:.|.|.:..: ....|.....:..||.:....:..:.|:.:
 Worm   105 FCKKGHEPLCHHIQNYGFDRS-GTFQEYLTIRGV-DAAKINKDTNLAAAAPILCAGVTVYKALKE 167

  Fly   226 AQAVVTQILSQRAATEPKRKPKILIVGTGGLALWAVRIASYHFATTGADNVDITVASLRDEGFRL 290
            :.....||:             :|....|||...|::.|.         .:.:.|.:: |.|.:.
 Worm   168 SNVAPGQII-------------VLTGAGGGLGSLAIQYAC---------AMGMRVVAM-DHGSKE 209

  Fly   291 ATEIKNVSVVQWNECLYEPQLIERTKDVCGGAVDVVIDFGTTSRSLHRSMHCLSKGGVVLISDEV 355
            | ..|.:....:.:....|.::.....:..|....||:|....:.:.:::..:.|.|.|:...  
 Worm   210 A-HCKGLGAEWFVDAFETPDIVSHITKLTEGGPHGVINFAVARKPMEQAVEYVRKRGTVVFVG-- 271

  Fly   356 AEKLLPKFSRL---SEQYQQEIIAISN---GTAEQLAELVELVANKKIEPPPHSVFPCEQAAEVI 414
                |||.|::   :..:....|.|..   |:...:.|.:|.| .:.|...|..:...|....|.
 Worm   272 ----LPKDSKVTFDTTPFIFNAITIKGSIVGSRLDVDEAMEFV-TRGIVKVPLELVKLEDVPAVY 331

  Fly   415 AKLCNSEIPGRAILRF 430
            .::.:.:|..||::.|
 Worm   332 QRMLDGKINSRAVVDF 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DratNP_610293.3 Qor 142..430 CDD:223677 56/319 (18%)
MDR 144..428 CDD:302572 56/315 (18%)
sodh-1NP_505991.1 AdhP 6..348 CDD:223992 72/406 (18%)
CAD3 9..347 CDD:176257 71/404 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D771875at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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