DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drat and Rtn4ip1

DIOPT Version :9

Sequence 1:NP_610293.3 Gene:Drat / 35687 FlyBaseID:FBgn0033188 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_570962.2 Gene:Rtn4ip1 / 170728 MGIID:2178759 Length:396 Species:Mus musculus


Alignment Length:460 Identity:95/460 - (20%)
Similarity:149/460 - (32%) Gaps:173/460 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KNCVFNFFVPIEDTPALGARIRIVCAGACYRRRD-------RANSITSMSSV-----------SS 117
            |.||..               |..||.||:.||.       |..|.||..|.           .:
Mouse     5 KTCVLR---------------RSACAAACFWRRTVIPKPPFRGISTTSARSTVMPAWVIDKYGKN 54

  Fly   118 EL-----------------------------------SDY-CPSVNSMSSPAHQGIREGSFFP-- 144
            |:                                   |.| ..::|....|.|...: |..||  
Mouse    55 EVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTK-GEEFPLT 118

  Fly   145 -GFEVAGVIESLGSEITEANNRGLRIGQRVIVYPFDETPAG--------YAELLVVP--DLKHVV 198
             |.:|:||:...|.::.             ...|.||..|.        .:|.:||.  ::.|. 
Mouse   119 LGRDVSGVVMECGLDVK-------------YFQPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHK- 169

  Fly   199 PIPDSLPMEVAAMLPTGALLAWNAVFKAQAVVTQILSQRAATEPKRKPKILIVGTGGLALWAVRI 263
              |.||....||.||..||.||:|:.|...     ||.|..   |.|..:::..:||:..:|:::
Mouse   170 --PKSLTHTQAASLPYVALTAWSAINKVGG-----LSDRNC---KGKRALILGASGGVGTFAIQV 224

  Fly   264 ---------------ASYHFATTGADNV-DITVASLRDE-------GFRL-----ATEIKNVSVV 300
                           ||......|||.| |.|:.|:.::       .|.|     :||...::.:
Mouse   225 MKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILDNVGGSTETWALNFL 289

  Fly   301 -QWNECLY----EPQLIERTK-DVCGGAVDVVIDFGTTS-RSLHRSMHCLSKGGVVLISDEVAEK 358
             :|:...|    .|.|:...: .|..|.:...:..||.: :.|.:.:|                 
Mouse   290 KKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKALKHLWQGVH----------------- 337

  Fly   359 LLPKFSRLSEQYQQEIIAISNGTAEQLAELVELVANKKIEPPPHSVFPCEQAAEVIAKLCNSEIP 423
                       |:......|....:::||||:.   .||.|.....||..:..|...|:......
Mouse   338 -----------YRWAFFMASGPYLDEIAELVDA---GKIRPVIERTFPFSEVPEAFLKVERGHAR 388

  Fly   424 GRAIL 428
            |:.::
Mouse   389 GKTVV 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DratNP_610293.3 Qor 142..430 CDD:223677 73/335 (22%)
MDR 144..428 CDD:302572 72/331 (22%)
Rtn4ip1NP_570962.2 Qor 43..395 CDD:223677 80/407 (20%)
RTN4I1 43..394 CDD:176210 80/407 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0604
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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