DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orc1 and CDC6

DIOPT Version :10

Sequence 1:NP_477303.1 Gene:Orc1 / 35686 FlyBaseID:FBgn0286788 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_012341.1 Gene:CDC6 / 853244 SGDID:S000003730 Length:513 Species:Saccharomyces cerevisiae


Alignment Length:481 Identity:113/481 - (23%)
Similarity:195/481 - (40%) Gaps:126/481 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 TPTRTRRSSTTTKTATTPSKGITTATA--TPMTPSQKMKKIRAGELSPSMQQRTDLPAKDSSKSE 551
            |||:..|.:.......||.:.:.....  |.:||....:|::.|  |.|:..||        |:.
Yeast     7 TPTKRIRRNLFDDAPATPPRPLKRKKLQFTDVTPESSPEKLQFG--SQSIFLRT--------KAL 61

  Fly   552 LQLAREQLHVSVVPKSLPCREREFENIYAFLEGKIQDQCGGCMYVSGVPGTGKTATVTGVIR--- 613
            ||.:.|.::::....:||.|..|:|.:..||...|.:.....:|::|.|||||||.:..:||   
Yeast    62 LQKSSELVNLNSSDGALPARTAEYEQVMNFLAKAISEHRSDSLYITGPPGTGKTAQLDMIIRQKF 126

  Fly   614 ---------------------TLQRMA----KQNELPAFEYLEINGMRLTEPRQAYVQI---YKQ 650
                                 .||.::    ....|.:.....||.:.|.||...:.:|   ::.
Yeast   127 QSLPLSLSTPRSKDVLRHTNPNLQNLSWFELPDGRLESVAVTSINCISLGEPSSIFQKIFDSFQD 191

  Fly   651 LTGKTVSWEQAHALLEKRFTTPAPRRVTTVLLVDELDIL----CNRRQDV-----VYNLLDWPTK 706
            |.|.|:..:....|  ::|..|..::.|.|:::||:|.|    .:..|.|     ::.|...||.
Yeast   192 LNGPTLQIKNMQHL--QKFLEPYHKKTTFVVVLDEMDRLLHANTSETQSVRTILELFLLAKLPTV 254

  Fly   707 SAAKLVVVTIANTMDLPERLLMGKVTSRLGLTR------LTFQPYSHKQLQEIVTARLGGSET-- 763
            |   .|::.:||::|:.:|.|     |||.|.|      :.||||:.:|:.|||..::....|  
Yeast   255 S---FVLIGMANSLDMKDRFL-----SRLNLDRGLLPQTIVFQPYTAEQMYEIVIQKMSSLPTII 311

  Fly   764 FKGEAVQLVARKVAAVSGDARRALDICRRATEIAD------------------------TAAVK- 803
            |:..|::..|:|.|..:||.|:..|:.|.:.||.:                        |:.|| 
Yeast   312 FQPMAIKFAAKKCAGNTGDLRKLFDVLRGSIEIYELEKRFLLSPTRGSLNSAQVPLTPTTSPVKK 376

  Fly   804 -----------------------------CVTMLHVQQ--ALAEMIASAKVQAIRNCSRMEQIFL 837
                                         .:..|::||  .|..:|.|.|:.:..........::
Yeast   377 SYPEPQGKIGLNYIAKVFSKFVNNNSTRTRIAKLNIQQKLILCTIIQSLKLNSDATIDESFDHYI 441

  Fly   838 QAIAAEVTRTGVEETTFMGVYQQVET 863
            :||....|...::...|:.:...:||
Yeast   442 KAITKTDTLAPLQRNEFLEICTILET 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc1NP_477303.1 BAH_Orc1p_animal 44..185 CDD:240070
PTZ00112 <559..795 CDD:240274 76/283 (27%)
Cdc6_C 837..917 CDD:215013 6/27 (22%)
CDC6NP_012341.1 CDC6 78..472 CDD:441083 94/400 (24%)
Blue background indicates that the domain is not in the aligned region.

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