DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc1 and ORC1B

DIOPT Version :10

Sequence 1:NP_477303.1 Gene:Orc1 / 35686 FlyBaseID:FBgn0286788 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_192999.1 Gene:ORC1B / 826875 AraportID:AT4G12620 Length:813 Species:Arabidopsis thaliana


Alignment Length:863 Identity:245/863 - (28%)
Similarity:384/863 - (44%) Gaps:207/863 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 KRSYRLIPLEIHLEQPEDNARPTRSSRKSLTAHRESKRSISARHD--DTAGN---KGSS-VEKRR 238
            ::||.......|..|..:...|.|.|.      |...|.|...:|  |..||   :|.: :.||.
plant    22 RKSYLSPSSTSHTPQTPETHTPLRRSA------RHVSRKIDLGNDPIDAPGNDPIEGMNLIRKRE 80

  Fly   239 RASMAASSSVEFIDVNSFICENKVSPIKIVGGRSVVRLSEKKNAPEINA---NYLPASPLTEKNA 300
            ||....::.|                        |...|:|...|:...   ::.|.||:..:..
plant    81 RAPRKPTTDV------------------------VPSKSKKTETPKKKKKIDSFTPVSPIRSETI 121

  Fly   301 KVETPKSRASAARRNL---------NLSLDRGADTTAD------------------------SDC 332
            |....|.|....:...         ::.:.|..|:.:|                        .||
plant   122 KKTKKKKRVYYNKVEFDETEFEIGDDVYVKRREDSNSDEEEDPEIEDCQICFKSDTNIMIECDDC 186

  Fly   333 LN--YSIVQQTPDPKTPSNDMKIKLRLSERRRSVRLASMDVDPLSLEEAVQEPNAQGRK-----R 390
            |.  :....:.|..:.|..|.  ..:..|.::|.:..::|         :.:| .:|:|     |
plant   187 LGGFHLKCLKPPLKEVPEGDW--ICQFCEVKKSGQSQTLD---------LPKP-PEGKKLARTMR 239

  Fly   391 LGVANGDIYHTPTKKSKEPLESAA---------ATEQTPSTRRKSILKSATSRLAEGTPRRSIHL 446
            ..:.:||::.....|..:.::...         ..|:|.|.|:...||            |.::|
plant   240 EKLLSGDLWAARIDKLWKEVDDGVYWIRARWYMIPEETVSGRQPHNLK------------RELYL 292

  Fly   447 SNIVEQRVFEDDEI--------ISTPK-------------------------------------- 465
            :|     .|.|.|:        :..||                                      
plant   293 TN-----DFADIEMECILRHCSVKCPKEFSKASNDGDDVFLCEYEYDVHWRSFKRLAELADGDSD 352

  Fly   466 -----RGRSKKTVQDNDEDYSPKKSVQKTPTRTRRSSTTTKTATTPSKGITTATATPMTPSQKMK 525
                 .||.::.|.|:||:......|.|:   .|...|:.:......||....          ::
plant   353 SDQEWNGRKEEEVDDSDEEMELDDEVLKS---KRGGLTSARGGANSRKGRFFG----------VE 404

  Fly   526 KIRAGELSPSMQQRTDLPAKDSSKSELQLAREQLHVSVVPKSLPCREREFENIYAFLEGKI-QDQ 589
            |: ..:|.|.       ..:...:|||:.|:..|.::..|||||||.:|.|.|.:|::|.| .||
plant   405 KV-GMKLIPE-------HVRCHKQSELEKAKATLLLATRPKSLPCRSKEMEEITSFIKGSISDDQ 461

  Fly   590 C-GGCMYVSGVPGTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQLTG 653
            | |.|||:.||||||||.:|..|::.|:...::..:..:.::||||::|..|...|..||:.|:|
plant   462 CLGRCMYIHGVPGTGKTISVLSVMKNLKAEVEEGSVSPYCFVEINGLKLASPENIYSVIYEALSG 526

  Fly   654 KTVSWEQAHALLEKRFTTPAPRRV------TTVLLVDELDILCNRRQDVVYNLLDWPTKSAAKLV 712
            ..|.|::|...|.:||.  ..:|:      ..:||:||||:|..|.|.|:||:||||||..:|||
plant   527 HRVGWKKALQCLNERFA--EGKRIGKEDEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLV 589

  Fly   713 VVTIANTMDLPERLLMGKVTSRLGLTRLTFQPYSHKQLQEIVTARLGGSETFKGEAVQLVARKVA 777
            |:.|||||||||:|| .:::||:|:.||.|.||:|.|||||::.||.|.:.|:..|::..:||||
plant   590 VLGIANTMDLPEKLL-PRISSRMGIQRLCFGPYNHTQLQEIISTRLNGIDAFEKTAIEFASRKVA 653

  Fly   778 AVSGDARRALDICRRATEIAD-------TAAVKCVTMLHVQQALAEMIASAKVQAIRNCSRMEQI 835
            |:||||||||:|||||.|:||       :|..:.|.|..|:.|:.||..:..:|.:::.|::.:|
plant   654 AISGDARRALEICRRAAEVADHRLNTNKSAKNQLVIMADVEAAIQEMFQAPHIQVMKSVSKLSKI 718

  Fly   836 FLQAIAAEVTRTGVEETTFMGVYQQVETIAAFMGVTFPPPGRALRLCSKLGAERLIISEHSRNDL 900
            ||.|:..|:.:||:.||||..|...|.:|....|..||.....|::...||..|:|:.|......
plant   719 FLTAMVHELYKTGMAETTFDRVATTVSSICLTNGEAFPGWDILLKIGCDLGECRIILCEPGEKHR 783

  Fly   901 FQKILLNVSADDIHYALR 918
            .||:.||..:||:.:||:
plant   784 LQKLQLNFPSDDVAFALK 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc1NP_477303.1 BAH_Orc1p_animal 44..185 CDD:240070 2/4 (50%)
PTZ00112 <559..795 CDD:240274 120/243 (49%)
Cdc6_C 837..917 CDD:215013 27/79 (34%)
ORC1BNP_192999.1 BAH_plant_2 189..344 CDD:240069 27/183 (15%)
PTZ00112 <424..727 CDD:240274 137/305 (45%)

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