DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc1 and CDC6

DIOPT Version :9

Sequence 1:NP_477303.1 Gene:Orc1 / 35686 FlyBaseID:FBgn0286788 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_565686.1 Gene:CDC6 / 817518 AraportID:AT2G29680 Length:539 Species:Arabidopsis thaliana


Alignment Length:535 Identity:124/535 - (23%)
Similarity:231/535 - (43%) Gaps:86/535 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   461 ISTPKRGRSKKTVQDNDEDYSPKKSVQKTPTRTRR-----SSTTTKTATTPSKGITT-------- 512
            |:.|.....|..|....|.....:|.:...:|.|:     ::..:.|...|...|:|        
plant     4 IAGPSSSPQKHVVGSRSESIGGVRSAEVNTSRKRKLISDSAAEVSATVVLPVNSISTPMKWKSPR 68

  Fly   513 --ATATPMTPSQKMK-----KIRAGELSPSMQQRTDLPAKDSSKSELQLAREQLHVSVVPKSLPC 570
              |.:.|.|..:::|     |:....:|..::.::....||.  .:::..:|.||||..|.::.|
plant    69 RCAVSIPKTSDEEIKEDSNEKLENPVISVCLEVKSKWNPKDD--EQMKAVKEALHVSKAPSTVVC 131

  Fly   571 REREFENIYAFLEGKIQDQCGGCMYVSGVPGTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGM 635
            ||.|...::.|::|.::.:..|.:|:.|.|||||:.::..|....:..|||..|...|.:.:|..
plant   132 REDEQRRVFEFVKGCMEQKKAGSLYICGCPGTGKSLSMEKVRLQAEEWAKQAGLHCPETVSVNCT 196

  Fly   636 RLTEPRQAYVQIYKQLTGKTVSWEQAHA------LLEKRFTTPAPRRVTTVLLV--DELDILCNR 692
            .||:.    ..|:.::.|...|.::|:.      .|::.|:....:..:.::|:  ||:|.|..|
plant   197 SLTKS----TDIFSKILGNYESGKKANGSFSPLQQLQRLFSQKQQQSRSKMMLIIADEMDYLITR 257

  Fly   693 RQDVVYNLLDWPTKSAAKLVVV-------------------------------TIANTMDLPERL 726
            .:.|::.|....|...::.:::                               .:||.:||.:|.
plant   258 DRGVLHELFMLTTLPLSRCILIGTVFCVINVHFLKSVSYGQTSFKFKVRICPPGVANAIDLADRF 322

  Fly   727 LMGKVTSRLGLTRLTFQPYSHKQLQEIVTARLGGSE--TFKGEAVQLVARKVAAVSGDARRALDI 789
            |....:.......:||:.||..|:..|:..||....  .|:..|:::.||||:|.|||.|:||.:
plant   323 LPKLKSLNCKPLVVTFRAYSKDQILRILQERLVALPFVAFQSNALEICARKVSAASGDMRKALCV 387

  Fly   790 CRRATEIAD--------------TAAVKCVTMLHVQQALAEMIASAKVQAIRNCSRMEQIFLQAI 840
            ||.|.||.:              ....:.|.|.|:..||::...|..|..|::..:.:||.: ..
plant   388 CRSALEILEIEVRGSIDQEPKGPVPECQVVKMDHMIAALSKTFKSPIVDTIQSLPQHQQIIV-CS 451

  Fly   841 AAEVTRTGVEETTFMGVYQQVETIAAFMGVTFPPPG--RALRLCSKLGAERLIISEHSRNDLFQK 903
            ||:..|...::.|...:.:....|.....:|  |.|  ....:|:.|..:.::....:|:|..::
plant   452 AAKAFRGSKKDRTIAELNKLYLEICKSSMIT--PAGITEFSNMCTVLNDQGILKLSLARDDKLKR 514

  Fly   904 ILLNVSADDIHYALR 918
            :.|.|...||.:||:
plant   515 VSLRVDEADITFALK 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc1NP_477303.1 BAH_Orc1p_animal 44..185 CDD:240070
AAA 591..741 CDD:214640 38/188 (20%)
AAA 594..739 CDD:278434 37/183 (20%)
Cdc6_C 837..917 CDD:215013 16/81 (20%)
CDC6NP_565686.1 CDC6 117..531 CDD:224391 104/420 (25%)
AAA_22 152..281 CDD:290137 32/132 (24%)
Cdc6_C 442..524 CDD:176573 16/84 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1474
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D935804at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100406
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.720

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