DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orc1 and cdc6

DIOPT Version :9

Sequence 1:NP_477303.1 Gene:Orc1 / 35686 FlyBaseID:FBgn0286788 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_001120805.1 Gene:cdc6 / 402825 ZFINID:ZDB-GENE-050506-131 Length:561 Species:Danio rerio


Alignment Length:569 Identity:160/569 - (28%)
Similarity:263/569 - (46%) Gaps:88/569 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 PTKKS-------KEPLESAAATEQTPSTRRKSILKSATSRLAEGTPRRSIHLSNIVEQRVFEDDE 459
            |.:||       |...|:....:.||.:.||:|:.::.....  :||..: |::.:.:|:     
Zfish    15 PRRKSSRLGSRPKSSCENKVDDKTTPLSPRKAIVGNSLGVCQ--SPRNKV-LNSPLSERL----- 71

  Fly   460 IISTPKRGRSKKTVQDNDEDY------SPKKSVQKTPTRTRRS---STTTKTATTPSKGITTATA 515
                |...| |:|..:|..:.      ||.|. :..|..:.|.   :..|...::|.:.|.::..
Zfish    72 ----PLSPR-KRTGDENGCNLPASMLGSPPKQ-RCAPLCSPRKLSFNENTPVLSSPPRPILSSHK 130

  Fly   516 TPMTPSQKMKKIRAGELS-PSMQQRTD--------LPAKDSSKSELQLAREQLHVSVVPKSLPCR 571
            .|::|..:....|..|.| .::..||:        .|.|   ||..|..::.|| :.||:.|..|
Zfish   131 VPLSPISRPSPTRLNETSCTNIIPRTEGKSPVMRLFPMK---KSGFQSVKQALH-TAVPERLLSR 191

  Fly   572 EREFENIYAFLEGKIQDQCGGCMYVSGVPGTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMR 636
            |.|...|.:||:..:..:....:|:||.|||||||.:..|::..:.:.|     ..:.:.||.|.
Zfish   192 EAERAAIVSFLQNHVVAEKPSSLYISGAPGTGKTACLNCVLQEQKALLK-----GIQTVVINCMN 251

  Fly   637 LTEPRQAYVQIYKQLTGKTVSWEQAHALLEKRFTTPAPRRVTTVLLVDELDILCNRRQDVVYNLL 701
            |......:..:.:||   .|....:.|.|||..|:..|   |.:|::||:|.|.::.|:|:|.:.
Zfish   252 LRSSHAIFPLLGEQL---EVPKGNSQARLEKYLTSSGP---TVLLVLDEMDQLDSKSQEVLYTIF 310

  Fly   702 DWPTKSAAKLVVVTIANTMDLPERL---LMGKVTSRLGLTRLTFQPYSHKQLQEIVTARL---GG 760
            :||....:::.::.|||.:||.:|:   |..|...|..|  |.|.||||::|..||..||   .|
Zfish   311 EWPYLPKSRVCLIGIANALDLTDRILPRLQAKPHCRPKL--LNFPPYSHEELNAIVQDRLTQVSG 373

  Fly   761 SETFKGEAVQLVARKVAAVSGDARRALDICRRATEIAD-----------TAAVKC--VTMLHVQQ 812
            .......|||..||||:|||||||:||||||||.||.:           ||:.|.  |::..|.:
Zfish   374 EGVLDAAAVQFCARKVSAVSGDARKALDICRRAVEIVEAGDRSKMASEPTASSKVSRVSVPQVAR 438

  Fly   813 ALAEMIAS--AKVQAIRNCSRMEQIFLQAIAAEVTRTGVEETTFMG----VYQQV--ETIAAFMG 869
            .|:|:...  |..........::|..|......:.|.|..:...:|    ||.::  :.....:|
Zfish   439 VLSEVYGDRMASSSGDGESFPLQQKLLVCCLLLIIRNGKSKEIQLGKLCEVYSKLCKQRQVGGVG 503

  Fly   870 VTFPPPGRALRLCSKLGAERLIISEHSRNDLFQKILLNVSADDIHYALR 918
            .|     ..|.|||.|.:..::..:.:::....||.|.:...|:.:||:
Zfish   504 QT-----ECLSLCSLLESRGILTLKKAKDARLTKISLKIEERDVEHALK 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc1NP_477303.1 BAH_Orc1p_animal 44..185 CDD:240070
AAA 591..741 CDD:214640 46/152 (30%)
AAA 594..739 CDD:278434 46/147 (31%)
Cdc6_C 837..917 CDD:215013 17/85 (20%)
cdc6NP_001120805.1 CDC6 184..548 CDD:224391 119/382 (31%)
AAA_16 187..323 CDD:289934 43/146 (29%)
Cdc6_C 474..546 CDD:215013 16/76 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1474
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D427050at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100406
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R177
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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