DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc1 and Cdc6

DIOPT Version :9

Sequence 1:NP_477303.1 Gene:Orc1 / 35686 FlyBaseID:FBgn0286788 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_035929.1 Gene:Cdc6 / 23834 MGIID:1345150 Length:589 Species:Mus musculus


Alignment Length:600 Identity:157/600 - (26%)
Similarity:260/600 - (43%) Gaps:110/600 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 RKRLGVANGDIYHTPTKKSKEPLESAAATEQTPSTRRKSILKSATSRLAE----------GTPRR 442
            |:..|:....:...|..:|:     ..||...|..:..:.||...||..|          .||..
Mouse    15 RQTSGIIQVCVAIMPQTRSQ-----TQATIGFPKKKLSNTLKKPNSRDCEVKLRNVQPVPTTPCV 74

  Fly   443 SIHLSNIVEQRVFEDDEIISTPKRGRSKKTVQDNDEDYSPKKSVQKT--PTRTRRSSTTTKTATT 505
            .:.|..:..::...||.:.:||:.           ...||.|..:|.  |.|    |.|.|....
Mouse    75 DVKLLPLSPRKRLGDDNLCNTPRL-----------SPCSPPKLGKKENGPPR----SHTWKGCRL 124

  Fly   506 PSKGITTATATPMTPSQKMK--KIRAGELSPSMQQRTD-----LPAKDS-----SKSE---LQLA 555
            ......|..|:|.....:::  :||:.....|.:.:.|     .|.|:|     .|.|   .|.|
Mouse   125 VFDDEPTFKASPPKEQDRVRQHQIRSSSAQRSPESKADPEQKCPPEKESVCIRLFKQEGTCYQQA 189

  Fly   556 REQLHVSVVPKSLPCREREFENIYAFLEGKIQDQCGGCMYVSGVPGTGKTATVTGVIRTLQRMAK 620
            :..|: :.||..||.||:|...|..||:..|..:..|.:|:||.|||||||.::.:::..::   
Mouse   190 KLVLN-TAVPDRLPAREQEMGVIRNFLKEHICGKKAGSLYLSGAPGTGKTACLSRILQDFKK--- 250

  Fly   621 QNELPAFEYLEINGMRLTEPRQAYVQIYKQL--------TGKTVSWEQAHALLEKRFTTPAPRRV 677
              |:..|:.:.:|.|.|...:..:..|.:::        .||.:..:     |||..|  |.:..
Mouse   251 --EVKGFKSILLNCMSLRSAQAVFPAIAQEIGREELCRPAGKDLMRK-----LEKHLT--AEKGP 306

  Fly   678 TTVLLVDELDILCNRRQDVVYNLLDWPTKSAAKLVVVTIANTMDLPERLLMGKVTSRLGLTR--- 739
            ..||::||:|.|.::.|||:|.|.:||..|.::||::.||||:||.:|:|     .||....   
Mouse   307 MIVLVLDEMDQLDSKGQDVLYTLFEWPWLSNSRLVLIGIANTLDLTDRIL-----PRLEARENCK 366

  Fly   740 ---LTFQPYSHKQLQEIVTARLGGSETFKGE-----AVQLVARKVAAVSGDARRALDICRRATEI 796
               |.|.||:..|:..|:..||  |:..|.:     |:|..||||:|||||.|:|||:||||.||
Mouse   367 PQLLNFPPYTRNQIAAILQDRL--SQVSKDQVLDSAAIQFCARKVSAVSGDIRKALDVCRRAIEI 429

  Fly   797 --------------------ADTAAVKCVTMLHVQQALAEMIASAKVQAIRNCS----RMEQIFL 837
                                :::...|.|.:.|:.|.::|:..:....:..|..    ..::|.:
Mouse   430 VESDVRSQTVLKPLSECKSPSESPVPKRVGLAHISQVISEVDGNRVTLSQENTQDSLPLQQKILV 494

  Fly   838 QAIAAEVTRTGVEETTFMGVYQQVETIAAFMGVTFPPPGRALRLCSKLGAERLIISEHSRNDLFQ 902
            .::.....|..::|.|...:|:...:|.....||.......|.|...|.:..|:..:.::.....
Mouse   495 CSLLLLTRRLKIKEVTLGKLYEAYSSICRKQQVTAVDQSECLSLSGLLESRGLVGLKKNKESRLT 559

  Fly   903 KILLNVSADDIHYAL 917
            |:.|.:...:|.:.|
Mouse   560 KVSLKIEEKEIEHVL 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc1NP_477303.1 BAH_Orc1p_animal 44..185 CDD:240070
AAA 591..741 CDD:214640 50/163 (31%)
AAA 594..739 CDD:278434 49/152 (32%)
Cdc6_C 837..917 CDD:215013 14/79 (18%)
Cdc6NP_035929.1 CDC6 197..574 CDD:224391 113/395 (29%)
AAA_16 200..341 CDD:289934 47/152 (31%)
Cdc6_C 494..574 CDD:215013 14/79 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1474
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D427050at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100406
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R177
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

Return to query results.
Submit another query.