DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orc1 and orc-1

DIOPT Version :10

Sequence 1:NP_477303.1 Gene:Orc1 / 35686 FlyBaseID:FBgn0286788 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_499347.1 Gene:orc-1 / 176486 WormBaseID:WBGene00012650 Length:636 Species:Caenorhabditis elegans


Alignment Length:675 Identity:193/675 - (28%)
Similarity:316/675 - (46%) Gaps:112/675 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 ASPLTEKNAKV-ETPKSRASAARRNLNLSLDRGA------------DTTADSDCLN-YSIVQQTP 342
            |:|:..::.:: ..|||.....:|: ::.| |||            .:::|||..: |:..:.  
 Worm    14 ATPVKRRSTRITNLPKSAPKIVKRS-SVRL-RGAPQCTYKSDSSSSSSSSDSDGEDEYAATKD-- 74

  Fly   343 DPKTPSNDMKIKLRLSERRRSVRLASMDVDPLSLEEAVQEPNAQGRKRLGVANGDIYHTPTKKSK 407
            :.|...:|.::::..|             |.:. |...:|.:...::...|...   .|||:   
 Worm    75 ELKAVDHDNQMEIDFS-------------DEIG-ENFSEEDSCSDKENRRVTRS---RTPTR--- 119

  Fly   408 EPLESAAATEQTPSTR------RKSILKSATSR--LAEGTPRRSIHLSNIVEQ-RVFEDDEIIST 463
                    .|:|||.|      :.|:.|.:||:  ..|....|.:.:|....: |||::::    
 Worm   120 --------LEETPSKRLARELSKASVSKVSTSKTLFKESKSPRKVEISRKTNKARVFQEED---- 172

  Fly   464 PKRGRSKKTVQDNDEDYS---PKKSVQKTPTRTRRSSTTTKTATTPSKGITTATATPM----TPS 521
                      .|:::|:|   .:|...||..|      |..|...|||.| |...||:    ||.
 Worm   173 ----------DDDEDDFSDEIDEKFYSKTNKR------TPITIKIPSKMI-TQKVTPLVISKTPG 220

  Fly   522 QKMK-KIRAGELSPSMQQRTDLPAKDSSKSELQLAREQLHVSVVPKSLPCREREFENIYAFLEGK 585
            ..:: :.||.:.|..::...| |....|.|.|:....:||:|.||:.||||:.|...|..|:...
 Worm   221 GTLRTRRRARQNSEELEDLVD-PLDSRSASTLKELASRLHLSKVPEKLPCRDIESREIEKFIREV 284

  Fly   586 IQDQCG--GCMYVSGVPGTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIY 648
            |..:.|  ..||:||||||||||||..|:.:   |.|..:...|.|:|:|.|..  .:..:|:||
 Worm   285 IDPKRGESSAMYISGVPGTGKTATVRAVVNS---MKKSKKCQKFVYVEVNAMIF--KKTVFVEIY 344

  Fly   649 ----------KQLTGKTVSWEQAHALLEKRFTTPAPRRVTTVLLVDELDILCNRRQDVVYNLLDW 703
                      |:.....::...|...|...|....|:|...|:|:||||.||||:|||:|::.:|
 Worm   345 NGIQEEYNISKKPQRAKITATAARQELNSIFKREDPKRPPIVVLIDELDSLCNRKQDVLYDIFEW 409

  Fly   704 PTKSAAKLVVVTIANTMDLPERLLMGKVTSRLGLTRLTFQPYSHKQLQEIVTARLGGSETFKGEA 768
            .....:|:.::.||||:|.|||:|..:..|||...||.||||.|:|::|||.|||.||.....:|
 Worm   410 TALPQSKVTIIGIANTLDFPERMLCQRNASRLDKRRLVFQPYQHEQIEEIVRARLQGSNLIDPKA 474

  Fly   769 VQLVARKVAAVSGDARRALDICRRATEIADTAAVKCVTMLHVQQALAEMIASAKVQAIRNCSRME 833
            |:|||:|||..:||.|:|||...||..:|.....:.:.:.||..|...::...|.:.::.. |:.
 Worm   475 VELVAKKVAMNTGDLRQALDFLCRAIRVAVERKSEKLELSHVIAAQNAVLEPLKYRLVKGL-RLH 538

  Fly   834 QIFLQAIAAEVTRTGVEETTFMGVYQQVETIAAFMGVTFPPP-----GRALRLCSKLGAERLIIS 893
            |..|......:||. .||..|..:|:....|.:.:....|..     |..|:|.|   ...:.:|
 Worm   539 QFTLFRTIESMTRE-QEEIIFANIYKNYCIICSEVSGIGPATDSFAYGMLLQLAS---TSLINLS 599

  Fly   894 EHSRNDLFQKILLNVSADDIHYALR 918
            :.....:.:::.|.:::.:...|::
 Worm   600 KGDHGMMNRRVKLGMTSMEAEKAIK 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc1NP_477303.1 BAH_Orc1p_animal 44..185 CDD:240070
PTZ00112 <559..795 CDD:240274 105/247 (43%)
Cdc6_C 837..917 CDD:215013 15/84 (18%)
orc-1NP_499347.1 CDC6 263..627 CDD:441083 125/372 (34%)
Blue background indicates that the domain is not in the aligned region.

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