DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc1 and Orc1

DIOPT Version :10

Sequence 1:NP_477303.1 Gene:Orc1 / 35686 FlyBaseID:FBgn0286788 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_315055.3 Gene:Orc1 / 1275769 VectorBaseID:AGAMI1_002946 Length:875 Species:Anopheles gambiae


Alignment Length:958 Identity:440/958 - (45%)
Similarity:590/958 - (61%) Gaps:129/958 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NARSVGQQVKWIGSQDELPPVKNLEHKNVYFYQKCIYGPLTLSVGDFILVSNADAAEPDTVSGCD 70
            |.......:.|:|.|.: |.|..::::...||.|||:|.|||.||:::|||:.||||||::.|||
Mosquito     7 NNNKFSSPITWVGKQYQ-PDVNCVKNRFAAFYSKCIFGALTLEVGNYVLVSDMDAAEPDSIDGCD 70

  Fly    71 VARILHMYEL--RELTDREPCRAIVQWYSWPKAIPHNKYDDDEVAIDFSLEVIEEHRPYDNDVAL 133
            ||||:||||:  .:.|:.:||||||:|||.|.|:|.....|:....| :.|||.:.| :..|:::
Mosquito    71 VARIVHMYEVLNSDCTNMDPCRAIVEWYSRPSALPKLITGDENYTFD-AREVIADSR-FSPDISI 133

  Fly   134 GAIYRKCIVLEGTSKTSAEEILKRHANKLKSTA-CPMFVSRYRFVKVK-RSY---RLIPL----- 188
            ..|:..|.|.....:|:..||     ..|||:: .|.|.:||:..|.. |.:   .|:|:     
Mosquito   134 ETIFNLCWVEHVPLQTNLAEI-----QALKSSSRGPSFFARYKLEKASGRKWSLNALVPMVDATT 193

  Fly   189 ------------EIHLEQPEDNARPTRSSRKSLTAHRESKRSISARHDDTAGNKGSSVEKRRRAS 241
                        |..:|.|:     |...:.:.|...|:..|:|      ...|...:|.|    
Mosquito   194 PRKRRSMYDLSNEPIIETPK-----TPKLKLTRTKSLENMPSLS------PNQKSKLIEDR---- 243

  Fly   242 MAASSSVEFIDVNSFICENKVSPIKIVGGRSVVRLSEKKN-APEINANYLPASPLTEKNAKVETP 305
                .:|:.|||...|.|       |....|.:.:|:.:| .|..|...|.....:..|.::. |
Mosquito   244 ----WAVKLIDVKQNIDE-------ITDILSEIEISDSENRRPPANQEKLQKVRRSSMNLRLH-P 296

  Fly   306 KSRASAARRNLNLSLDRGADTTADSDCLNYSIVQQTPDPKTPSNDMKIKLRLSERRRSVRLASMD 370
            |..|.|            :::..|.:|||||||:.  ...|....:||||||||.:::..     
Mosquito   297 KPSAYA------------SNSGTDDECLNYSIVRD--GATTSERQIKIKLRLSENQKNTE----- 342

  Fly   371 VDPLSLEEAVQEPNAQGRKRLGVANGDIYH-TPTKKSKEPLESAAATEQTPSTR--RKSILKSAT 432
             .|.||           |||:..::....| :|.|..|..|.:...:..|||.|  ||||||:.:
Mosquito   343 -SPKSL-----------RKRVTSSSVPPEHVSPPKCRKSLLPADVESVSTPSGRSHRKSILKTPS 395

  Fly   433 SRLAE-GTPRRSIHLSNIVEQRVFEDDEIISTPKRGRSKKTVQDNDEDYSPKK------SVQKTP 490
            :..:: |||:|:|.||||:|:           ...||....:.    :.||||      ...|||
Mosquito   396 THASQVGTPKRNIQLSNIIEE-----------CSNGRRVSRLL----ELSPKKLEPLPIDEPKTP 445

  Fly   491 TRTRRSSTTTKTATTPSKGITTATATPMTPSQKMKKIRAGELSPSMQQRTDLPAKDSSKSELQLA 555
            .|..|.|:.  .||.||   :.:..||.: :.|||.||.|.:.|::..| |.|.:|.: :||.:|
Mosquito   446 KRNSRLSSV--GATLPS---SASKGTPKS-ANKMKLIRDGTIKPNIHSR-DAPVQDGA-NELAVA 502

  Fly   556 REQLHVSVVPKSLPCREREFENIYAFLEGKIQDQCGGCMYVSGVPGTGKTATVTGVIRTLQRMAK 620
            ||:||||..|.||||||:|:|.||.||||||.|.||||||:|||||||||||.|.|:|.|:.:::
Mosquito   503 RERLHVSATPSSLPCREKEYEEIYNFLEGKIFDGCGGCMYISGVPGTGKTATTTAVLRALKHLSE 567

  Fly   621 QNELPAFEYLEINGMRLTEPRQAYVQIYKQLTGKTVSWEQAHALLEKRFTTPAPRRVTTVLLVDE 685
            :.::|.||:::||||||||||||||.||:||||||::||||:.||.|||||.||||:||||||||
Mosquito   568 EEDIPKFEFVDINGMRLTEPRQAYVHIYRQLTGKTLAWEQAYNLLNKRFTTKAPRRITTVLLVDE 632

  Fly   686 LDILCNRRQDVVYNLLDWPTKSAAKLVVVTIANTMDLPERLLMGKVTSRLGLTRLTFQPYSHKQL 750
            ||||||:|||||||||:|||...|:|:||||||||||||||||||::|||||||||||||:.:||
Mosquito   633 LDILCNKRQDVVYNLLNWPTMPTAQLIVVTIANTMDLPERLLMGKISSRLGLTRLTFQPYNFRQL 697

  Fly   751 QEIVTARLGGSETFKGEAVQLVARKVAAVSGDARRALDICRRATEIADTAAVK-----CVTMLHV 810
            ||||.|||.|...|..:||||||||||||||||||||||||||||:||..|.|     .|:|:||
Mosquito   698 QEIVMARLVGMSAFNSDAVQLVARKVAAVSGDARRALDICRRATELADDQARKSNESVTVSMMHV 762

  Fly   811 QQALAEMIASAKVQAIRNCSRMEQIFLQAIAAEVTRTGVEETTFMGVYQQVETIAAFMGVTFPPP 875
            ||||.|||.||||:.||:|||:||:||||:.|||||||:||..|:|||.|.|::|||.|:..|.|
Mosquito   763 QQALTEMITSAKVKTIRSCSRLEQLFLQAVTAEVTRTGIEECNFLGVYSQFESLAAFSGIIVPNP 827

  Fly   876 GRALRLCSKLGAERLIISEHSRNDLFQKILLNVSADDIHYALRVEEMV 923
            |||:.:|::|.|.||:|.|..::|::||||||:|.||:|:||:..:::
Mosquito   828 GRAMAICARLAASRLLICECGKSDIYQKILLNISTDDVHFALQASKLL 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc1NP_477303.1 BAH_Orc1p_animal 44..185 CDD:240070 60/147 (41%)
PTZ00112 <559..795 CDD:240274 179/235 (76%)
Cdc6_C 837..917 CDD:215013 45/79 (57%)
Orc1XP_315055.3 None

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