DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc1 and Cdc6

DIOPT Version :10

Sequence 1:NP_477303.1 Gene:Orc1 / 35686 FlyBaseID:FBgn0286788 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_314072.4 Gene:Cdc6 / 1274882 VectorBaseID:AGAMI1_008092 Length:470 Species:Anopheles gambiae


Alignment Length:276 Identity:52/276 - (18%)
Similarity:102/276 - (36%) Gaps:64/276 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPEGPEAETFAFQAEIAQLMS------LIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSK 59
            |..|||..|   :..:.|.::      ..:.:.|..::    |.::..|..|.:::..::|..|.
Mosquito    26 MVMGPELST---EQSLTQRLAECHMRLQYLESMYRARQ----EDVALLSQYLGQLQIVNVTGASA 83

  Fly    60 LESGKELFIKIIPNKEAGTLTLIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQF 124
            ..          |......:.|:| |:......|:.|...|:|.|:          |:.||....
Mosquito    84 PP----------PPPPLPVVNLLD-GLSPEARQLLRNASHISKGGS----------ANGSMARSQ 127

  Fly   125 GVGFYSAYLVADKVVVTSKNNDDEQYVWESSAGGSFTVRPDSGEPLGRG-TKIVL---HIKEDQL 185
            .:...:||.....::      ||        ||   ::||...:..||. ..|||   .::.::.
Mosquito   128 NIRLPNAYHFLPHLL------DD--------AG---SLRPAYLQSKGRSDVSIVLGVPTVRREKQ 175

  Fly   186 EYLEESKIKQIVNKHSQFIGYPIKLLKKREEDKAKFENLCKVMKSVLESKVEKVMVSNRLVDSPC 250
            .||..:....|.|.:.:.....:.::...|.|....:.:.:.::|..:..||     :.|:|   
Mosquito   176 SYLLGTLHNLIENMNDEEQNETLIIVYIGETDMESVQLIARQIESSFDQHVE-----SGLID--- 232

  Fly   251 CIVTSQYGWSANMERI 266
             |:.....:..|.||:
Mosquito   233 -IIAPAPSYYPNFERL 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc1NP_477303.1 BAH_Orc1p_animal 44..185 CDD:240070 28/144 (19%)
PTZ00112 <559..795 CDD:240274
Cdc6_C 837..917 CDD:215013
Cdc6XP_314072.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.