DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-G and pigo

DIOPT Version :9

Sequence 1:NP_610292.2 Gene:PIG-G / 35685 FlyBaseID:FBgn0033187 Length:927 Species:Drosophila melanogaster
Sequence 2:NP_001120383.1 Gene:pigo / 100145458 XenbaseID:XB-GENE-5945117 Length:1088 Species:Xenopus tropicalis


Alignment Length:1140 Identity:255/1140 - (22%)
Similarity:430/1140 - (37%) Gaps:321/1140 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVYTIGMLTAFLCGAVLFLIGF------FPASYSVAEKESTVPEG----RP-TALLGMELTPPPP 61
            |::...:...|..|..:|:.||      .....|.|:..|:.|:|    .| |..|       |.
 Frog     7 LLFLAWVSILFYSGIWIFMSGFLLMRIELNNQSSCADLPSSGPQGPLQQHPGTCWL-------PR 64

  Fly    62 AYDSFVLLLVDALRDDF-----------PDATSMPVAYS------RACEKLKLHVDIPTVTMPRL 109
            .:...|::::|||:.||           |....:||.:.      |.........|.||.||.|:
 Frog    65 RFQKAVIIIIDALKYDFAKYEPGITNPKPYQNKLPVIHQLSTSQPRHARLYPFRADPPTTTMQRI 129

  Fly   110 KSITTGTLSNFIDIALNVGHTEQMQDSFLHRLKQQNRVVSFAGDHTWVKLFPSEFTRQVENHDSF 174
            |.:|||:|..|:|:..|.......:|:.:|:|.:..|.|.|.||.||..|||.:|.:.. ...||
 Frog   130 KGMTTGSLPTFVDVGSNFASYAIQEDNLIHQLVENGRRVVFMGDDTWDGLFPKKFFKSY-FFPSF 193

  Fly   175 YVNDFYEGDRNVTKTLETELERSDWSLLILHYLGLDHIGHVEGNASPRVPLKLKEMDEVVKKILD 239
            .|.|.:..|..:.:.|....:..||.::|.|:||:||.||..|...|....||.:|::|:..:::
 Frog   194 NVKDLHTVDNGILQHLYPTRDSGDWDVIIAHFLGVDHCGHKHGPDHPETANKLAQMNQVISSLVE 258

  Fly   240 HKSFPNVLLMLTGDHGMADGGGHGGNTPAETLVPLYLYYNNCSKTPSASKRYN-------QIDLA 297
            |.. ...||::.|||||.|.|.|||::..|.:..|:||    ||:|..|...:       |::|.
 Frog   259 HLD-EETLLLVAGDHGMTDTGDHGGDSEKEVMAALFLY----SKSPLFSHELSKEAETVPQVNLV 318

  Fly   298 PTLSVLLSVEIPTLSIGCLIPEMLQSLSLEHQLYA--YFYNAHHLLNKARV-KFGHEIVHRSDYY 359
            ||||:||.:.||..::|.::|::......|..:.|  ...:|.| :|..:| :|.|         
 Frog   319 PTLSLLLGLPIPYSNLGAVMPDLFSWPKKESSVSAALTLASAVH-INALQVGRFLH--------- 373

  Fly   360 TWYQNATLLHKKLLRPLR---------------EGDGGGASQVYYQN-AKLNYMRVAR---EISD 405
            ::...|..|....||.|:               |...|..::..|:| .:.:.:||.|   :...
 Frog   374 SYSLAAGDLPSDKLRDLKSLLSSLMSEYEQLISERSRGSWTESEYENRLRQHVLRVQRYLVQARA 438

  Fly   406 LLSESLVKFDYGFIAVGLALTTSTSLHIVISV---LYLDLTEQLQLD----GLKVG--------- 454
            :..||..:|....:..|.|:..:|.|...::.   :.|||:.:..|.    |: ||         
 Frog   439 VCMESWARFHPLRMLAGCAILAATCLLCYLAAETGMALDLSCKFLLTYPLFGV-VGAGALLAFGK 502

  Fly   455 ----------QLWLSVIAA-----------------------VVLNYTSHALDIIMTSSTLYSIL 486
                      .||..||||                       :.|.::...|.:|....:|:|..
 Frog   503 WLSLIEWDCLSLWALVIAASQLTFFYSFRKQMQVRVRLRFRQLSLLFSGPCLILIFRCGSLFSDS 567

  Fly   487 LLVPIS-IAVYLTIDVAQALL-------KIALPPLY-----TRRLKISI------PLPLPLLACY 532
            .:|... :|.:|.:.:....:       ::.||.|.     |.:|.:|.      |:.|.||...
 Frog   568 FVVAEGHVAPFLLMSLLVLTIYKLHWDGRLTLPTLSPLGGDTTKLTLSTGYRKDGPILLALLGAL 632

  Fly   533 AI-------------RTLTLGSSSFI-------EFEYNTWYYLGNTLILLT-AFRTLRWRITKTN 576
            .:             .|.....|.|:       :.:.....|||..:.|:. .:...:|.....|
 Frog   633 TLCVRLSGIFHNCREETPDCHPSLFLAPLSNVKDPQLKNISYLGCIVCLVAIVYMVRKWLQHYGN 697

  Fly   577 VELN---------GRHLYTIASTCLWQMR----------KVLVVLMLLTLMRYIHRLQAIRSTVV 622
            :..:         |..|..:|.||.|.:.          :.|:.|.|:...|.::.|.|:....:
 Frog   698 LNSSSALVLYVRWGFPLIALAITCHWALSAGAEDSLARLRDLIQLALVACPRAVYGLAALGLVFL 762

  Fly   623 IFSMLLLWARLHRHSQLPQSLA--SGAALFMVYCFRGLNGQVLFFDVPSHMAAKL-MVPTLVIFW 684
            :::.:.::.:..|.|....::.  |||                    |...|..| ::|.:    
 Frog   763 LWNPVTVFMKSSRDSDADNTVTTYSGA--------------------PGSQAELLHVIPQI---- 803

  Fly   685 CCLALVLMLGYR---------------------AALPQAHSFGKVPPTGALLQLLQTNLTSSLLL 728
                      ||                     .|..:|:....|.....:       :|.|||.
 Frog   804 ----------YRKMQRTMKSRLRHGTDEEEENKGAAIEAYGLSSVYSAAMI-------VTLSLLT 851

  Fly   729 AALLQRVHNILLLPVLLVALQQTYKLCDVYG---------TSARKFSVRLVHVYKIIMTIFLARM 784
            ..|| .:|:..:.|..|:.|.:.:.:..::.         .|:.:|||..   |.:|........
 Frog   852 MVLL-LLHSERITPAFLILLVEAFVILHIHSHVQNLYYAPDSSDQFSVPW---YAVISWALAGTQ 912

  Fly   785 FFFYQGNSNSLSTIDLTPGYIG-----QTNYNPSIVAIFVTLNTYSADI-----------HAFLY 833
            :|:..|:......|.....::|     :.|..|   |:.|..||:||.|           ..||.
 Frog   913 WFYSTGHQPVFPAIHWNSAFVGFQEGHENNITP---AVLVAANTFSAHILFSAGSSLLLLWPFLC 974

  Fly   834 -----------------LVVHTLRS--DLRSVGIMQLHPPY-SIAADSLIAPLYAALIMLPAAFY 878
                             |:...||.  |..:..::||...| .|....|::.:.||:|:      
 Frog   975 ETPGKKKKGKKEAEEMPLMEMRLRENPDKFAGALLQLGTKYLFIQGVQLLSCVCAAMIL------ 1033

  Fly   879 LCLLVGFRYHLFIYSVFSPKVLYDC--YTVLVFYL 911
                   |.||.::.||:||.|::.  :||...:|
 Frog  1034 -------RRHLMVWKVFAPKFLFEAAGFTVSSVFL 1061

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-GNP_610292.2 GPI_EPT_2 60..317 CDD:293748 93/280 (33%)
pigoNP_001120383.1 Npp1 57..>282 CDD:224441 75/233 (32%)
GPI_EPT_3 63..338 CDD:293747 93/280 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 73 1.000 Domainoid score I9132
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313125at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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