DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1602 and znf1001

DIOPT Version :9

Sequence 1:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_021327400.1 Gene:znf1001 / 798047 ZFINID:ZDB-GENE-080213-7 Length:337 Species:Danio rerio


Alignment Length:246 Identity:84/246 - (34%)
Similarity:117/246 - (47%) Gaps:22/246 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 LRQWYYKN-----TKHAIYAGSTAEKFYLEVCRFMPAKMYKQRL-------VCEFCHQITSSDHV 379
            ||....||     ||..:|..|..||.:    |...:....|::       .|..|.:...:...
Zfish    91 LRDSELKNHLSVHTKEKLYPCSVCEKSF----RHQRSLRNHQKIHTGVGEYKCFECEKTFCTAES 151

  Fly   380 LQSHIFKAHNIGELPFKCTLCDRSFVGRCELANHIQRVHIG-KTHKCTHCERSFAVMSDLQLHIR 443
            |:.|  |..:.||.|:.|:||::.|.....:..| .|:|.| |.:||::||:.|..:..|:.|.|
Zfish   152 LKIH--KRIHTGEKPYICSLCNKRFSQLAHMKTH-ARIHTGEKPYKCSYCEKRFRRLGQLRQHER 213

  Fly   444 THTGHKPYVCEHCGKAFRLRSQMTLHVTAIHTKIRAFKCTMCPKDFVKKVDLSDHIKGHLNIRDK 508
            ||||.|||.|.||.|.|.....:..|| .|||..:.:||:.|.|.|.....|..|.:.|...:..
Zfish   214 THTGEKPYKCSHCDKRFSDGGNLRQHV-RIHTGEKPYKCSHCDKRFSDSGLLRQHERVHTGEKPY 277

  Fly   509 ICSVCGKGFTSCHALIRHRQIHSEVKKFVCKLCDSRFSQFVGLNTHMKRTH 559
            |||.|.|.|:....|.:|.:||:..|.:.|..||.||.|..||..| :|.|
Zfish   278 ICSYCDKRFSGGGNLRQHVRIHTGEKPYKCSYCDKRFRQLGGLKIH-ERIH 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1602NP_610291.2 GT1 157..244 CDD:304916
MADF_DNA_bdg 273..356 CDD:287510 11/33 (33%)
C2H2 Zn finger 367..388 CDD:275368 5/20 (25%)
C2H2 Zn finger 397..418 CDD:275368 6/20 (30%)
COG5048 <423..554 CDD:227381 52/130 (40%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..460 CDD:290200 14/22 (64%)
C2H2 Zn finger 453..470 CDD:275368 5/16 (31%)
C2H2 Zn finger 482..502 CDD:275368 6/19 (32%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
C2H2 Zn finger 538..559 CDD:275368 10/20 (50%)
znf1001XP_021327400.1 COG5048 27..327 CDD:227381 83/244 (34%)
C2H2 Zn finger 27..47 CDD:275368
C2H2 Zn finger 55..75 CDD:275368
C2H2 Zn finger 83..103 CDD:275368 4/11 (36%)
C2H2 Zn finger 111..131 CDD:275368 5/23 (22%)
C2H2 Zn finger 139..159 CDD:275368 5/21 (24%)
C2H2 Zn finger 167..187 CDD:275368 6/20 (30%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
SFP1 <222..323 CDD:227516 37/101 (37%)
C2H2 Zn finger 223..243 CDD:275368 7/20 (35%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 7/19 (37%)
C2H2 Zn finger 307..327 CDD:275368 10/20 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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