Sequence 1: | NP_610291.2 | Gene: | CG1602 / 35684 | FlyBaseID: | FBgn0033186 | Length: | 577 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038964622.1 | Gene: | Prdm5 / 689788 | RGDID: | 1588700 | Length: | 599 | Species: | Rattus norvegicus |
Alignment Length: | 613 | Identity: | 137/613 - (22%) |
---|---|---|---|
Similarity: | 218/613 - (35%) | Gaps: | 168/613 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 PTDVEVAQWQEFVLHIRNVHSKVRSMEDDFEPVGENSTESGHVDPPEEKP-----QAEESIFQQD 83
Fly 84 ESADGACVQLHIDAVRSSTN----------ETEESDVSLVTDEEESVQDEDPSEPALDDANLKTT 138
Fly 139 PTYKFH------------PSFFRRDHRTIKFIEIYKEHPCLWNPAHSDYKEPK-----KCKEALK 186
Fly 187 RMAIDLEATVSVFLNEMALKLAIKKVHMQFNTVHKRVVSGKQKPQSLAFSIYKLCCFLNA----- 246
Fly 247 -SND------EEGATNNEKIKLDFSKKNKLTTDL--IEMYANFPQLYDSNH--KEFSNMS----- 295
Fly 296 ----SRKQAYESMAAEISVPNVD-------INSDDIFRAIQNLRQWYYKNTKHAIYAGSTAEKFY 349
Fly 350 LEVC--RFMPAKMYKQR---------LVCEFCHQITSSDHVLQSHIFKAHNIGELPFKCTLCDRS 403
Fly 404 FVGRCELANHIQRVH-IGKTHKCTHCERSFAVMSDLQLHIRTHTGHKPYVCEHCGKAFRLRSQMT 467
Fly 468 LHVTAIHTKIRAFKCTMCPKDFVKKVDLSDHIKGHLNIRDKICSVCGKGFTSCHALIRHRQIHSE 532
Fly 533 VKKFVCKLCDSRFSQFVGLNTHMKRTHN 560 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1602 | NP_610291.2 | GT1 | 157..244 | CDD:304916 | 13/91 (14%) |
MADF_DNA_bdg | 273..356 | CDD:287510 | 13/104 (13%) | ||
C2H2 Zn finger | 367..388 | CDD:275368 | 5/20 (25%) | ||
C2H2 Zn finger | 397..418 | CDD:275368 | 7/20 (35%) | ||
COG5048 | <423..554 | CDD:227381 | 45/130 (35%) | ||
C2H2 Zn finger | 425..445 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 437..460 | CDD:290200 | 11/22 (50%) | ||
C2H2 Zn finger | 453..470 | CDD:275368 | 4/16 (25%) | ||
C2H2 Zn finger | 482..502 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 510..530 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 538..559 | CDD:275368 | 8/20 (40%) | ||
Prdm5 | XP_038964622.1 | PR-SET_PRDM5 | 2..128 | CDD:380967 | 17/93 (18%) |
C2H2 Zn finger | 169..190 | CDD:275368 | 6/33 (18%) | ||
COG5048 | 186..590 | CDD:227381 | 106/439 (24%) | ||
C2H2 Zn finger | 201..221 | CDD:275368 | 4/38 (11%) | ||
C2H2 Zn finger | 233..256 | CDD:275368 | 4/22 (18%) | ||
C2H2 Zn finger | 266..286 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 291..311 | CDD:275368 | 2/19 (11%) | ||
C2H2 Zn finger | 319..339 | CDD:275368 | 2/19 (11%) | ||
C2H2 Zn finger | 347..367 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 375..395 | CDD:275368 | 5/20 (25%) | ||
C2H2 Zn finger | 403..420 | CDD:275368 | 5/16 (31%) | ||
C2H2 Zn finger | 432..452 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 460..480 | CDD:275368 | 5/20 (25%) | ||
C2H2 Zn finger | 488..508 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 516..536 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 544..564 | CDD:275368 | 8/20 (40%) | ||
C2H2 Zn finger | 573..594 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24393 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |