DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1602 and CG4374

DIOPT Version :9

Sequence 1:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_001262874.1 Gene:CG4374 / 42767 FlyBaseID:FBgn0039078 Length:772 Species:Drosophila melanogaster


Alignment Length:47 Identity:20/47 - (42%)
Similarity:29/47 - (61%) Gaps:0/47 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 HKCTHCERSFAVMSDLQLHIRTHTGHKPYVCEHCGKAFRLRSQMTLH 469
            |.|:.|.:.|.....:.:|||||||.||:.|..|||:||.::.:..|
  Fly   649 HYCSICAKGFKDKYSVNVHIRTHTGEKPFACSLCGKSFRQKAHLAKH 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1602NP_610291.2 GT1 157..244 CDD:304916
MADF_DNA_bdg 273..356 CDD:287510
C2H2 Zn finger 367..388 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
COG5048 <423..554 CDD:227381 20/47 (43%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..460 CDD:290200 13/22 (59%)
C2H2 Zn finger 453..470 CDD:275368 7/17 (41%)
C2H2 Zn finger 482..502 CDD:275368
C2H2 Zn finger 510..530 CDD:275368
C2H2 Zn finger 538..559 CDD:275368
CG4374NP_001262874.1 zf-C2H2 649..671 CDD:278523 7/21 (33%)
C2H2 Zn finger 651..671 CDD:275370 6/19 (32%)
zf-H2C2_2 663..688 CDD:290200 14/24 (58%)
C2H2 Zn finger 679..699 CDD:275370 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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