DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1602 and CG17803

DIOPT Version :9

Sequence 1:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_001303488.1 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster


Alignment Length:575 Identity:114/575 - (19%)
Similarity:186/575 - (32%) Gaps:184/575 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 CSYCPTDVEVAQWQEFVLHIRNVHSKVRSMEDDFEPVGENSTESGHVDPPEEKPQAEESIFQQDE 84
            ||.|...|..:  .||....:.|..|:|           .:||..::...:|:.::|......:|
  Fly   134 CSTCQETVNKS--MEFRAKCQQVDKKLR-----------QTTEKYNIQICDEEMESELENVLYEE 185

  Fly    85 SADGACVQLHIDAVRSSTNETEESDVSLVTDEEESVQDEDPSEPALDDANLKTTPTYKFHPSFFR 149
            ||..|...:.::...|......|.    |.||::...|.:|::.:|.:..|..            
  Fly   186 SAQQAKGVVGLEDFSSELLPDSEG----VLDEDDFPLDAEPTQFSLSEDELDL------------ 234

  Fly   150 RDHRTIKFIEIYKEHPCLWNPAHSDYKEPKKCKEALKRMAIDLEATVSVFLNEMALKLAIKKVHM 214
             |..|.|...:.:...|      ::....:|||...:...:|..|.|        .|:.:.:.:.
  Fly   235 -DRDTEKDFALEQNKSC------NEIISIRKCKTKEEIGKVDHGAKV--------YKVVLGEYNS 284

  Fly   215 QFNTVHKRVVSGKQKPQSLAFSIYKLCCFLNASNDEEGATNNEKIKLDFSKKNKLTTDLIEMYAN 279
            ...|..|..:|..:|||            |..|.:|:.....|:|:..                 
  Fly   285 LKETAPKYSLSLPKKPQ------------LRVSPEEKNRRRRERIQAK----------------- 320

  Fly   280 FPQLYDSNHKEFSNMSSRKQAYESMAAEISVPNVDINSDDIFRAIQNLRQWYYKNTKHAIYAGST 344
             |..|                                                            
  Fly   321 -PLNY------------------------------------------------------------ 324

  Fly   345 AEKFYLEVCRFMPAKMYKQRLVCEFCHQITSSDHVLQSHIFKAHNIGELPFKCTLCDRSFVGRCE 409
                                 ||:.|.........||.|:.: ||..: .|:|..|.:.|.....
  Fly   325 ---------------------VCDKCGHTFRQRSQLQMHLLR-HNRAK-NFECPECPKKFYDLYT 366

  Fly   410 LANHIQRVHIGK-THKCTHCERSFAVMSDLQLH----------IRTHT-----GHKPYVCEHCGK 458
            ...|::.:|.|: ...|.||..|||..|....|          |||..     |...:.|..|.|
  Fly   367 RNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSRHYCTQCTK 431

  Fly   459 AFRLRSQMTLHVTAIHTKIRAFKCTMCPKDFVKKVDLSDHIKGHLNIRDKI---CSVCGKGFTSC 520
            ::..:..:.||:. .|...|.|:|.:|...|..    ...:|.|..:.||.   |.:|.|||...
  Fly   432 SYTSKKGLVLHMN-FHNGSRPFQCKICQMKFAD----PSAMKRHQALHDKFPIRCDICLKGFLLR 491

  Fly   521 HALIRHRQIHSEVKKFVCKLCDSRFSQFVGLNTHMKRTHNILRNNSQKG-KDAVD 574
            ..|.:|:.:|:.:....|::||..:.....||.| |.| ::.|:|.||. |:.|:
  Fly   492 SQLTKHQDVHTGMHPHRCEICDVHYRHRYNLNKH-KNT-DLHRDNMQKAIKEEVN 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1602NP_610291.2 GT1 157..244 CDD:304916 14/86 (16%)
MADF_DNA_bdg 273..356 CDD:287510 2/82 (2%)
C2H2 Zn finger 367..388 CDD:275368 5/20 (25%)
C2H2 Zn finger 397..418 CDD:275368 4/20 (20%)
COG5048 <423..554 CDD:227381 40/148 (27%)
C2H2 Zn finger 425..445 CDD:275368 10/29 (34%)
zf-H2C2_2 437..460 CDD:290200 8/37 (22%)
C2H2 Zn finger 453..470 CDD:275368 4/16 (25%)
C2H2 Zn finger 482..502 CDD:275368 4/19 (21%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
C2H2 Zn finger 538..559 CDD:275368 7/20 (35%)
CG17803NP_001303488.1 zf-AD 86..160 CDD:214871 9/38 (24%)
COG5048 <323..528 CDD:227381 58/293 (20%)
zf-C2H2 324..346 CDD:278523 7/103 (7%)
C2H2 Zn finger 326..346 CDD:275368 5/20 (25%)
C2H2 Zn finger 354..375 CDD:275368 4/20 (20%)
C2H2 Zn finger 383..401 CDD:275368 8/17 (47%)
C2H2 Zn finger 426..446 CDD:275368 5/20 (25%)
C2H2 Zn finger 454..474 CDD:275368 5/23 (22%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
C2H2 Zn finger 509..528 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439994
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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