DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1602 and CG17803

DIOPT Version :10

Sequence 1:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster


Alignment Length:575 Identity:114/575 - (19%)
Similarity:186/575 - (32%) Gaps:184/575 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 CSYCPTDVEVAQWQEFVLHIRNVHSKVRSMEDDFEPVGENSTESGHVDPPEEKPQAEESIFQQDE 84
            ||.|...|..:  .||....:.|..|:|           .:||..::...:|:.::|......:|
  Fly   134 CSTCQETVNKS--MEFRAKCQQVDKKLR-----------QTTEKYNIQICDEEMESELENVLYEE 185

  Fly    85 SADGACVQLHIDAVRSSTNETEESDVSLVTDEEESVQDEDPSEPALDDANLKTTPTYKFHPSFFR 149
            ||..|...:.::...|......|.    |.||::...|.:|::.:|.:..|..            
  Fly   186 SAQQAKGVVGLEDFSSELLPDSEG----VLDEDDFPLDAEPTQFSLSEDELDL------------ 234

  Fly   150 RDHRTIKFIEIYKEHPCLWNPAHSDYKEPKKCKEALKRMAIDLEATVSVFLNEMALKLAIKKVHM 214
             |..|.|...:.:...|      ::....:|||...:...:|..|.|        .|:.:.:.:.
  Fly   235 -DRDTEKDFALEQNKSC------NEIISIRKCKTKEEIGKVDHGAKV--------YKVVLGEYNS 284

  Fly   215 QFNTVHKRVVSGKQKPQSLAFSIYKLCCFLNASNDEEGATNNEKIKLDFSKKNKLTTDLIEMYAN 279
            ...|..|..:|..:|||            |..|.:|:.....|:|:..                 
  Fly   285 LKETAPKYSLSLPKKPQ------------LRVSPEEKNRRRRERIQAK----------------- 320

  Fly   280 FPQLYDSNHKEFSNMSSRKQAYESMAAEISVPNVDINSDDIFRAIQNLRQWYYKNTKHAIYAGST 344
             |..|                                                            
  Fly   321 -PLNY------------------------------------------------------------ 324

  Fly   345 AEKFYLEVCRFMPAKMYKQRLVCEFCHQITSSDHVLQSHIFKAHNIGELPFKCTLCDRSFVGRCE 409
                                 ||:.|.........||.|:.: ||..: .|:|..|.:.|.....
  Fly   325 ---------------------VCDKCGHTFRQRSQLQMHLLR-HNRAK-NFECPECPKKFYDLYT 366

  Fly   410 LANHIQRVHIGK-THKCTHCERSFAVMSDLQLH----------IRTHT-----GHKPYVCEHCGK 458
            ...|::.:|.|: ...|.||..|||..|....|          |||..     |...:.|..|.|
  Fly   367 RNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSRHYCTQCTK 431

  Fly   459 AFRLRSQMTLHVTAIHTKIRAFKCTMCPKDFVKKVDLSDHIKGHLNIRDKI---CSVCGKGFTSC 520
            ::..:..:.||:. .|...|.|:|.:|...|..    ...:|.|..:.||.   |.:|.|||...
  Fly   432 SYTSKKGLVLHMN-FHNGSRPFQCKICQMKFAD----PSAMKRHQALHDKFPIRCDICLKGFLLR 491

  Fly   521 HALIRHRQIHSEVKKFVCKLCDSRFSQFVGLNTHMKRTHNILRNNSQKG-KDAVD 574
            ..|.:|:.:|:.:....|::||..:.....||.| |.| ::.|:|.||. |:.|:
  Fly   492 SQLTKHQDVHTGMHPHRCEICDVHYRHRYNLNKH-KNT-DLHRDNMQKAIKEEVN 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1602NP_610291.2 MADF_DNA_bdg 157..244 CDD:463144 14/86 (16%)
MADF_DNA_bdg 273..356 CDD:463144 2/82 (2%)
C2H2 Zn finger 367..388 CDD:275368 5/20 (25%)
C2H2 Zn finger 397..418 CDD:275368 4/20 (20%)
C2H2 Zn finger 425..445 CDD:275368 10/29 (34%)
zf-H2C2_2 437..460 CDD:463886 8/37 (22%)
C2H2 Zn finger 453..470 CDD:275368 4/16 (25%)
C2H2 Zn finger 482..502 CDD:275368 4/19 (21%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
C2H2 Zn finger 538..559 CDD:275368 7/20 (35%)
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 9/38 (24%)
SUF4-like 320..>376 CDD:411020 15/156 (10%)
C2H2 Zn finger 323..351 CDD:411020 9/110 (8%)
C2H2 Zn finger 326..346 CDD:275368 5/20 (25%)
C2H2 Zn finger 354..375 CDD:411020 4/20 (20%)
C2H2 Zn finger 354..375 CDD:275368 4/20 (20%)
C2H2 Zn finger 383..401 CDD:275368 8/17 (47%)
C2H2 Zn finger 426..446 CDD:275368 5/20 (25%)
C2H2 Zn finger 454..474 CDD:275368 5/23 (22%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
C2H2 Zn finger 509..528 CDD:275368 7/19 (37%)

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