DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1602 and zld

DIOPT Version :9

Sequence 1:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster


Alignment Length:137 Identity:40/137 - (29%)
Similarity:59/137 - (43%) Gaps:28/137 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 KCTLCDRSFVGRCELANHIQRVHIGKTHKCTHCERSFAVMSDLQLHIRTHTGHKPYVCEHCGKAF 460
            ||..||:.|...|.|..|               .:||            |:|..|:.|:.|||.|
  Fly  1327 KCLECDKEFTKNCYLTQH---------------NKSF------------HSGEYPFRCQKCGKRF 1364

  Fly   461 RLRSQMTLHVTAIHTKIRAFKCTMCPKDFVKKVDLSDHIKG-HLNIRDKICSVCGKGFTSCHALI 524
            :.....|.|:....|:.:..||.:|||.|..|.||..|::. |..::..:|.:|.|||.....|.
  Fly  1365 QSEDVYTTHLGRHRTQDKPHKCELCPKQFHHKTDLRRHVEAIHTGLKQHMCDICEKGFCRKDHLR 1429

  Fly   525 RHRQIHS 531
            :|.:.|:
  Fly  1430 KHLETHN 1436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1602NP_610291.2 GT1 157..244 CDD:304916
MADF_DNA_bdg 273..356 CDD:287510
C2H2 Zn finger 367..388 CDD:275368
C2H2 Zn finger 397..418 CDD:275368 7/20 (35%)
COG5048 <423..554 CDD:227381 32/110 (29%)
C2H2 Zn finger 425..445 CDD:275368 2/19 (11%)
zf-H2C2_2 437..460 CDD:290200 7/22 (32%)
C2H2 Zn finger 453..470 CDD:275368 6/16 (38%)
C2H2 Zn finger 482..502 CDD:275368 9/20 (45%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
C2H2 Zn finger 538..559 CDD:275368
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983
LIM 1328..1389 CDD:259829 22/87 (25%)
C2H2 Zn finger 1328..1349 CDD:275368 9/47 (19%)
C2H2 Zn finger 1357..1377 CDD:275368 7/19 (37%)
C2H2 Zn finger 1386..1407 CDD:275368 9/20 (45%)
zf-H2C2_2 1398..1422 CDD:290200 7/23 (30%)
zf-C2H2 1413..1435 CDD:278523 7/21 (33%)
C2H2 Zn finger 1415..1435 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.