DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1602 and E430018J23Rik

DIOPT Version :9

Sequence 1:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_932128.2 Gene:E430018J23Rik / 101604 MGIID:2141981 Length:461 Species:Mus musculus


Alignment Length:447 Identity:99/447 - (22%)
Similarity:158/447 - (35%) Gaps:128/447 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 RRDHRTIKFIEIYKEHPCL----------WNP-------------AHSDYKEPKKCKEALKRMAI 190
            |..:..:..:|:..:.|.|          |.|             .|||.:..|:.    ||...
Mouse    52 RETYGLLASLEVGGDKPALICWVEEESEVWGPGAQEPEVAMCRTEVHSDCRHEKEG----KRPRE 112

  Fly   191 DLEATVSVFLNEMALKLAIKKVHMQFNTVHKRVVSGKQKPQSLAFSIYKLCCFLNA--SNDEEG- 252
            :.:||                         |:::|.:..|.....|.....|.|..  .|.::| 
Mouse   113 ETKAT-------------------------KKILSPEAGPMEPRPSFASPSCNLELLFKNSQQGH 152

  Fly   253 ---ATNNEKIKLD-----------FSKKNKLTTDLIEMYANFPQLYDSNHKEFSNMSSRKQAYES 303
               |.:|..:|.|           |:.::||...|   |.:      :..|.|......|  |..
Mouse   153 PTVAVHNPILKADQRHGCHVCGKSFAHQSKLVEHL---YTH------TGEKPFQCPDCDK--YFG 206

  Fly   304 MAAEISVPNVDINSDDIFRAIQNLRQWYYKNTKHAIYAGSTAEKFYLEVCRFMPAKMYKQRLVCE 368
            .|:.:|:                         ..||:.|....:                   |.
Mouse   207 RASSLSM-------------------------HRAIHRGERPHQ-------------------CP 227

  Fly   369 FCHQITSSDHVLQSHIFKAHNIGELPFKCTLCDRSFVGRCELANHIQRVHIG-KTHKCTHCERSF 432
            .|.:..:....|.:|::.  :.||.||.|..|::||.....|::| :.:|.| :.|.|:.|.|:|
Mouse   228 DCGKSFTQRSTLVAHMYT--HTGEKPFHCPDCNKSFSRPSSLSSH-RAIHRGERPHCCSDCGRAF 289

  Fly   433 AVMSDLQLHIRTHTGHKPYVCEHCGKAFRLRSQMTLHVTAIHTKIRAFKCTMCPKDFVKKVDLSD 497
            ...|.|..|:|.|||.|||.|..||:.|...|.:..|...:|:.:..|.||.|.:.|.:...|..
Mouse   290 THRSGLIAHLRVHTGEKPYCCADCGRCFSQSSGLREHQRVVHSGVTPFTCTHCGRAFARAAYLQC 354

  Fly   498 HIKGHLNIRDKICSVCGKGFTSCHALIRHRQIHSEVKKFVCKLCDSRFSQFVGLNTH 554
            |::.|...:...|..||:.|.....:..||:.||..:.:.|..|..||.....:..|
Mouse   355 HMRTHTGEKPYSCPDCGRCFRQSSDMAAHRRTHSGERPYPCPQCGRRFPTKSAVTKH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1602NP_610291.2 GT1 157..244 CDD:304916 18/109 (17%)
MADF_DNA_bdg 273..356 CDD:287510 11/82 (13%)
C2H2 Zn finger 367..388 CDD:275368 4/20 (20%)
C2H2 Zn finger 397..418 CDD:275368 6/20 (30%)
COG5048 <423..554 CDD:227381 42/130 (32%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
zf-H2C2_2 437..460 CDD:290200 12/22 (55%)
C2H2 Zn finger 453..470 CDD:275368 5/16 (31%)
C2H2 Zn finger 482..502 CDD:275368 6/19 (32%)
C2H2 Zn finger 510..530 CDD:275368 6/19 (32%)
C2H2 Zn finger 538..559 CDD:275368 5/17 (29%)
E430018J23RikNP_932128.2 KRAB 22..81 CDD:214630 4/28 (14%)
KRAB 22..61 CDD:279668 1/8 (13%)
C2H2 Zn finger 170..190 CDD:275368 5/22 (23%)
zf-H2C2_2 183..207 CDD:290200 7/34 (21%)
C2H2 Zn finger 198..218 CDD:275368 5/46 (11%)
zf-H2C2_2 210..235 CDD:290200 6/68 (9%)
COG5048 <223..383 CDD:227381 50/181 (28%)
C2H2 Zn finger 226..246 CDD:275368 4/21 (19%)
zf-H2C2_2 239..259 CDD:290200 8/21 (38%)
C2H2 Zn finger 254..302 CDD:275368 17/48 (35%)
zf-H2C2_2 298..319 CDD:290200 12/20 (60%)
C2H2 Zn finger 310..331 CDD:275368 6/20 (30%)
C2H2 Zn finger 339..359 CDD:275368 6/19 (32%)
zf-H2C2_2 351..376 CDD:290200 7/24 (29%)
C2H2 Zn finger 367..387 CDD:275368 6/19 (32%)
zf-H2C2_2 383..402 CDD:290200 6/18 (33%)
C2H2 Zn finger 395..415 CDD:275368 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832247
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.