DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1603 and wdn

DIOPT Version :10

Sequence 1:NP_610290.2 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster


Alignment Length:563 Identity:130/563 - (23%)
Similarity:202/563 - (35%) Gaps:141/563 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 DAADPAIAYGPDEFFEVIENSNGVD--QWMEADSKDIQYEEDATAWSAATNNSWEFGPGGSSLEL 129
            ||..|..| ..||....:...|..|  ..::.:|.||......|..||:..|       |:||..
  Fly    28 DAGTPTKA-AHDEILSSLLRINNFDSISSIKDESLDIDLSACVTISSASLVN-------GNSLSS 84

  Fly   130 PAGKEVTQMDESSQNHIPLNTDDDDVDCSDFFMSEDDLAPPRKPGRPPRRTRPG-QVFKFKVSFI 193
            .....|  :|||:||:..||...|        :..||||.......|...|... ...:|.|:|:
  Fly    85 TDFWRV--LDESAQNNTELNLSSD--------VCRDDLAATSSSTVPSTLTSDNHSSSEFSVTFL 139

  Fly   194 RSNPRVLHLIQAYKEHPCLWNPSDEHYQDEPARSMAYEAIMERMDRKANVLFTVEELKKTLEQLH 258
            |..|.     .|:...|.                           :|.:...|...:|.:.||||
  Fly   140 RPEPP-----NAFTNSPF---------------------------KKTSSSGTSTPVKLSPEQLH 172

  Fly   259 VQYTLALETKQ----RGKLVGLAA---RYFAKCEFLSVAPVVTPRENEEDNDLTAIKLNFKEENL 316
            .|:.|.:...|    :.||....|   :.|.:          .|.|.:...:....|:...|..|
  Fly   173 QQHQLQMPQSQLLQRKPKLPAATAVRLKVFKE----------EPPEEKHPPEQVVTKVEVCESEL 227

  Fly   317 ITTSFIETYANYPVLYNQALPDFGSIEIRADAFKR---MAKEFQPV----------VKAN----E 364
            :..||        .::.||    .|.|..|||...   .|.|.:|:          :..|    |
  Fly   228 LPPSF--------TIFQQA----KSAESVADAASMPPPAASETKPLEVDPAPLHKCLDCNGLLLE 280

  Fly   365 TDVYIAVNKLRRWLYDAIRRLKSKELIQKCSKQEVQYLQMCSFLP------AKGSESQVLYCDYC 423
            |...:|.::.      |..||:   |..:||:.:.::..:.....      .:|.:.....|..|
  Fly   281 TPDEVAKHEA------AAHRLR---LTYRCSECQREFELLAGLKKHLKTHRTEGRKDTWKKCPDC 336

  Fly   424 DK-----------RFHGDYNLRVHIVKAHEVGDLPYLCSFCPRRFDRHVDMDRHKLRSHFERKLK 477
            .|           :.|.|              :..|.|..|.::|.:.:::..|......|:..:
  Fly   337 GKCLKLGSMWMHRKIHSD--------------NKKYQCDICGQKFVQKINLTHHARIHSSEKPYE 387

  Fly   478 CQYCEKSFAVDTDLKVHTLIHTGERPHVCDICGKTFRLKLLLDHHVNGVHLNIRPYSCNMCTKTF 542
            |..|:|.|...:.|:.|...|...|.:.|:.|||.::.:..|..| |.|||..||::|.:|.|:|
  Fly   388 CPECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKMYKTERCLKVH-NLVHLEQRPFACTVCDKSF 451

  Fly   543 RKKFELANHIKGHLNIRDKKCEYCDATFYDHSSLSRH-RRSHR 584
            ....:|..|...|..:|..||.||...|.:..:..:| ||.|:
  Fly   452 ISNSKLKQHSNIHTGMRPFKCNYCPRDFTNFPNWLKHTRRRHK 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1603NP_610290.2 MADF_DNA_bdg 202..287 CDD:463144 16/91 (18%)
MADF_DNA_bdg 321..408 CDD:463144 21/103 (20%)
C2H2 Zn finger 420..441 CDD:275368 5/31 (16%)
COG5048 <424..583 CDD:227381 45/170 (26%)
C2H2 Zn finger 450..471 CDD:275368 4/20 (20%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 506..527 CDD:275368 7/20 (35%)
C2H2 Zn finger 535..555 CDD:275368 6/19 (32%)
C2H2 Zn finger 563..583 CDD:275368 7/20 (35%)
wdnNP_476900.1 zf-C2HE <279..321 CDD:465082 9/50 (18%)
C2H2 Zn finger 301..321 CDD:275368 2/19 (11%)
C2H2 Zn finger 333..352 CDD:275368 3/18 (17%)
zf-C2H2 358..380 CDD:395048 5/21 (24%)
C2H2 Zn finger 360..380 CDD:275368 4/19 (21%)
zf-H2C2_2 376..395 CDD:463886 5/18 (28%)
zf-C2H2 386..408 CDD:395048 6/21 (29%)
C2H2 Zn finger 388..436 CDD:275368 15/48 (31%)
zf-H2C2_2 400..425 CDD:463886 8/24 (33%)
C2H2 Zn finger 416..433 CDD:275368 6/17 (35%)
SUF4-like 440..>507 CDD:411020 19/55 (35%)
C2H2 Zn finger 444..465 CDD:411020 6/20 (30%)
C2H2 Zn finger 444..464 CDD:275368 6/19 (32%)
zf-H2C2_2 457..481 CDD:463886 9/23 (39%)
C2H2 Zn finger 472..493 CDD:411020 7/20 (35%)
C2H2 Zn finger 472..493 CDD:275368 7/20 (35%)

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