DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1603 and CG4730

DIOPT Version :10

Sequence 1:NP_610290.2 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster


Alignment Length:329 Identity:75/329 - (22%)
Similarity:126/329 - (38%) Gaps:68/329 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 APV-VTPRENEEDNDLTAIKLNFKEENLITTSFIETYAN----YPVLYNQ--ALPDFGSIEIRAD 347
            ||| :...|....:..|:::|:    |.......|.|.|    ..|:|:|  ||..:...||...
  Fly    23 APVKLVSHEVSLSDSTTSLELS----NCCRLCLEEPYPNQMLDMTVIYDQEAALSYYDCYEICTK 83

  Fly   348 AFKRMAKEFQPVVKANETDVYIAVNKLRRWLYDAIRRLKSKELIQKCSKQEVQYLQMCSFLPAKG 412
            ...|...:.:|........|.:      :|.||..:::       ..:.|:::.:    |:..:.
  Fly    84 EDLRQNPKNEPRTLCKRCAVEL------KWAYDFHKKM-------AIANQQLREI----FVATEA 131

  Fly   413 SESQVLYCDYCDKRFHGDYNLRVHIVKAHEVGDLPY----------------LCSFCPRRFDRHV 461
            :..|  ..|..|:....|.|....:.:..|..:.|.                .|.||.:.|..|.
  Fly   132 NTEQ--EDDVEDEENEADMNEEFLMEEIEEKQETPIDSLEDIVPRNRHTGKSNCKFCHKEFRNHS 194

  Fly   462 DMDRHKL-----RSHFERKLKCQYCEKSFAVDTDLKVHT-LIHTGERPHVCDICGKTFRLKLLLD 520
            .|.:|::     |.:|    :|..|::.:.....||||. ..|.....| ||.|||.|.:...|:
  Fly   195 RMAKHQMIHLANRPNF----RCSQCDRVYLTKQALKVHVDSKHRQSGVH-CDTCGKVFAIAKALE 254

  Fly   521 HHVNGVHLNIRPYSCNMCTKTFRKKFELANHIKGHLNIRDKK----CEY--CDATFYDHSSLSRH 579
            .| ...|....||||::|.:.|.::    :|:..|..::...    ||:  |..:|...|||..|
  Fly   255 IH-KRYHNRDFPYSCDLCDRRFAQR----SHLTVHQQVKHSGSRFICEFPGCQKSFTSSSSLRNH 314

  Fly   580 RRSH 583
            ..:|
  Fly   315 ECTH 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1603NP_610290.2 MADF_DNA_bdg 202..287 CDD:463144
MADF_DNA_bdg 321..408 CDD:463144 17/92 (18%)
C2H2 Zn finger 420..441 CDD:275368 4/20 (20%)
COG5048 <424..583 CDD:227381 47/186 (25%)
C2H2 Zn finger 450..471 CDD:275368 8/25 (32%)
C2H2 Zn finger 478..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 506..527 CDD:275368 8/20 (40%)
C2H2 Zn finger 535..555 CDD:275368 4/19 (21%)
C2H2 Zn finger 563..583 CDD:275368 8/21 (38%)
CG4730NP_651413.1 zf-AD 46..124 CDD:462262 17/90 (19%)
C2H2 Zn finger 183..203 CDD:275368 7/19 (37%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
C2H2 Zn finger 240..260 CDD:275368 8/20 (40%)
C2H2 Zn finger 268..289 CDD:275368 5/24 (21%)
C2H2 Zn finger 296..318 CDD:275368 8/21 (38%)
C2H2 Zn finger 325..346 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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