DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1603 and MTF-1

DIOPT Version :9

Sequence 1:NP_001260778.1 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001097560.1 Gene:MTF-1 / 39089 FlyBaseID:FBgn0040305 Length:1006 Species:Drosophila melanogaster


Alignment Length:531 Identity:120/531 - (22%)
Similarity:176/531 - (33%) Gaps:146/531 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 MEADSKDIQYEEDATAWSAATNNSWEFGPGGSSLELPAGKEVTQMDESSQNHIPLNTDDDDVDCS 158
            :|||...|.:.::.:.:.:.|..|    ..|....|..|             :.|:|.|......
  Fly    76 LEADGLGIIHGDNYSIYGSQTAES----TSGEQQVLNLG-------------LTLDTGDAQATYG 123

  Fly   159 DFFMSEDDLAPPRKPGRPPRRTRPGQVFKFKVSFIRSNPRVLHLIQAYKEHPCLWNPSDEHYQDE 223
            |.|.::|.|...:..|.       .||.   ||....|  ...|.......|....|...|:..|
  Fly   124 DLFGAQDQLTASQTHGH-------SQVV---VSAAADN--AFSLADQLTPLPITVIPITYHHTTE 176

  Fly   224 PARSMAYEA--IMERMDRKANVLFTVEELKKTLE-QLHVQYTLALETKQRGKLVGLAARYFAKCE 285
            ...|...|.  |....|..|.| |.::::..||| |...|..:.::..                .
  Fly   177 NLSSSHSEVPLIASLSDITAQV-FNLDDICFTLEYQFENQRLVQVQPP----------------T 224

  Fly   286 FLSVAPVVTPRE---------------NEEDNDLTAIKLNFKEENLITTSFIETY-ANYPVLYNQ 334
            .:|::.|.:|.|               |....|.|:   |......|.||:::.| .|.|     
  Fly   225 VVSLSMVSSPNEAANPPINCDNDQGTGNSISRDSTS---NSPAYFTIETSYVDEYDPNEP----- 281

  Fly   335 ALPDFGSIEIRADAFKRMAKEFQPVVKANETDVYIAVNKLRRWLYDAIRRLKSKELIQKC---SK 396
                        |..:::|...||.|...:.|            .:.:.|....:.:...   |.
  Fly   282 ------------DEDEQLAHCIQPGVLHQDVD------------EEEVERQDENDQLMALAYESS 322

  Fly   397 QEVQYLQMCSFLPAKGSESQV---------------LYC--DYCDKRFHGDYNLRVHIVKAHEVG 444
            .|......|::.....|.|.:               ..|  |.|.|.|...|:|::| |:.| ..
  Fly   323 DEALSRYRCNYENCYRSYSTIGNLRTHLKTHTGDYSFKCPEDGCHKAFLTSYSLKIH-VRVH-TK 385

  Fly   445 DLPYLC--SFCPRRFDRHVDMDRHKLRSHFERKLKCQYCEKSFAVDTDLKVHTLIHTGERPHVC- 506
            ..||.|  |.|.:.|:....:..| ||.|......|:.|:|.|...:|||.|...||.|||:.| 
  Fly   386 VKPYECEVSGCDKAFNTRYRLHAH-LRLHNGETFNCELCQKCFTTLSDLKKHMRTHTQERPYKCP 449

  Fly   507 -DICGKTFRLKLLLDHHV---NGVHLNIRPYSC--NMCTKTFRKKFELANHIKGH---------- 555
             |.|||.|    ...||:   ...|...:||.|  :.|.|:|.....|.:|.|.|          
  Fly   450 EDDCGKAF----TASHHLKTHRRTHTGEKPYPCQEDSCQKSFSTSHSLKSHKKTHQRQLQNKGRK 510

  Fly   556 ---LNIRDKKC 563
               |..:..||
  Fly   511 KRPLKTQQTKC 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1603NP_001260778.1 MADF_DNA_bdg 202..287 CDD:287510 17/87 (20%)
GT1 321..408 CDD:304916 13/90 (14%)
C2H2 Zn finger 420..441 CDD:275368 9/22 (41%)
COG5048 <424..583 CDD:227381 52/162 (32%)
C2H2 Zn finger 450..471 CDD:275368 7/22 (32%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
zf-H2C2_2 490..513 CDD:290200 14/24 (58%)
C2H2 Zn finger 506..527 CDD:275368 8/25 (32%)
C2H2 Zn finger 535..555 CDD:275368 7/21 (33%)
C2H2 Zn finger 563..583 CDD:275368 1/1 (100%)
MTF-1NP_001097560.1 zf-C2H2_aberr 329..471 CDD:293622 44/148 (30%)
C2H2 Zn finger 331..353 CDD:275368 3/21 (14%)
zf-H2C2_2 345..372 CDD:290200 5/26 (19%)
C2H2 Zn finger 361..383 CDD:275368 9/22 (41%)
zf-H2C2_2 375..402 CDD:290200 10/28 (36%)
C2H2 Zn finger 391..413 CDD:275368 7/22 (32%)
zf-C2H2 418..440 CDD:278523 8/21 (38%)
C2H2 Zn finger 420..440 CDD:275368 8/19 (42%)
zf-H2C2_2 432..458 CDD:290200 15/29 (52%)
COG5048 442..>519 CDD:227381 23/80 (29%)
C2H2 Zn finger 448..470 CDD:275368 8/25 (32%)
zf-H2C2_2 462..489 CDD:290200 8/26 (31%)
C2H2 Zn finger 478..500 CDD:275368 7/21 (33%)
DUF3682 862..>931 CDD:289231
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457139
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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