DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1603 and Kah

DIOPT Version :10

Sequence 1:NP_610290.2 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster


Alignment Length:158 Identity:44/158 - (27%)
Similarity:71/158 - (44%) Gaps:9/158 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 HGDYNLRVHIVKAHEVGDLPYLCSFCPRRFDRHVDMDRHKL--RSHFERKLK-CQYCEKSFAVDT 489
            ||:..   .|:.:..:.:..::|..|.:::....::.||:.  ||..::|.: |.||||.:....
  Fly   102 HGEQG---EILNSTSLLEDEHICPECGKKYSTSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMP 163

  Fly   490 DLKVHTLIHTGERPHVCDICGKTFRLKLLLDHHVNGVHLNIRPYSCNMCTKTFRKKFELANHIKG 554
            ...:|  :.|..:...|..|||.|....||..|:. .|...:|:.|.:|.|.|..|..|..||:.
  Fly   164 AYSMH--VRTHNQGCECQFCGKRFSRPWLLQGHIR-THTGEKPFKCGVCEKAFADKSNLRAHIQT 225

  Fly   555 HLNIRDKKCEYCDATFYDHSSLSRHRRS 582
            |.|.:...|..|...|...|.|.:|..|
  Fly   226 HSNTKPHTCARCGKAFALKSYLYKHEES 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1603NP_610290.2 MADF_DNA_bdg 202..287 CDD:463144
MADF_DNA_bdg 321..408 CDD:463144
C2H2 Zn finger 420..441 CDD:275368 3/12 (25%)
COG5048 <424..583 CDD:227381 44/158 (28%)
C2H2 Zn finger 450..471 CDD:275368 5/22 (23%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 506..527 CDD:275368 8/20 (40%)
C2H2 Zn finger 535..555 CDD:275368 8/19 (42%)
C2H2 Zn finger 563..583 CDD:275368 7/20 (35%)
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 4/19 (21%)
zf-C2H2 176..198 CDD:395048 8/22 (36%)
C2H2 Zn finger 178..198 CDD:275368 8/20 (40%)
zf-H2C2_2 191..214 CDD:463886 7/23 (30%)
zf-C2H2 204..226 CDD:395048 8/21 (38%)
C2H2 Zn finger 206..226 CDD:275368 8/19 (42%)
C2H2 Zn finger 234..250 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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