DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1603 and CG11906

DIOPT Version :9

Sequence 1:NP_001260778.1 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster


Alignment Length:607 Identity:111/607 - (18%)
Similarity:183/607 - (30%) Gaps:192/607 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 EDATAWSAATNNSWEFGPGGSSLELPAGKEVTQMDESSQNHI--PLNTDDDDVDCSDFFMSEDDL 167
            :||||..          |..||.......|.....:..:||:  ....:.:|.:|:....::...
  Fly     2 QDATAPD----------PEPSSTNGNCSVEHDNRQDQDENHVGAEREAEANDANCTVCGAAKASA 56

  Fly   168 APPRKPGRPPRRTRPGQVFKFKVSFIRSNPRVLHLIQAYKEHPCLWNPSDEHYQDEPARSMAYEA 232
            ....:.....:| |..:.:|.....|||..:.:.:     |..|..|     ...|..||:... 
  Fly    57 LLDLRSNHVMQR-RLSRDWKIHADVIRSTLKAICV-----ECVCKLN-----MHSEVTRSLMQR- 109

  Fly   233 IMERMDRKANVLFTVEELKKT------------LEQLHVQYTLALETKQRGKLVGLAARYFAKCE 285
             |:|:.|...     |..|.|            :....|..|| :|:::.....|.:.|..:.|.
  Fly   110 -MQRLQRSGG-----ETTKVTTTTTSPSQHSPPIADAEVSTTL-IESQEEVAHSGQSVRSRSSCS 167

  Fly   286 FLSVAPVVTP-----RENEEDNDLTAIKLNFKEENLITTSFIETYANYPVLYNQALPDFGSIEIR 345
            .|.|.....|     :|.||.:          .|.....:.:|.:            :.|....|
  Fly   168 VLEVYLAQQPYSPSAKETEEKH----------AEGWKWRTRLECH------------ECGRAYFR 210

  Fly   346 ADAFKRMAKEFQPVVKANETDVYIAVNKLRRWLYD---AIRRLKSKELIQKCSKQEVQYLQMCSF 407
            .|.:.:..:......:.......:....|....||   ..|.::|.. |..|...:.::..:.|.
  Fly   211 RDYYAQHLRRCSKTRRKQPRPSRVKCRVLNEASYDEEAPSRAIRSSR-IYYCRHCDAEFETLISK 274

  Fly   408 LPAKGSESQVLY-CDYCDKRFHGDYNLRVH------------IVKAHEVGD------LPYLCSF- 452
            ...:..:.|..| ||.|:.:....|...:|            ||:..|.|.      :|..||. 
  Fly   275 RQHERMKHQQRYPCDLCEAQLDTKYEWEMHHTICQAKQEALAIVEQQEAGQTVMTSRVPRACSMR 339

  Fly   453 -----CPRRFDRHVDMDRHK--------------------------------------------- 467
                 |...:||: |||..:                                             
  Fly   340 SRSRACSEAWDRY-DMDEEEEDEEDEEIESGGEELEEGEEDAMYARRMNFTGDWIVNHSRSNSNS 403

  Fly   468 -------------LRSHFERK----------LKCQYCEKSFAV---DTDLKVHTLIHTGERPHV- 505
                         :.:|....          ||.|...|||..   |...:..||:...:..:: 
  Fly   404 AGNLSLLYGDYGMVETHMTTDKEYDLYLLDLLKTQVRLKSFTCFTPDCGYQTDTLVALMKHDYME 468

  Fly   506 --------CDICGKTFRLKLLLDHHVNGVHLNIRP-YSCNMCTKTFRKKFELANHIKGHLNIRDK 561
                    |..||..|..|:.||:|   :||..|. |.|:.|    |::|||.:.:..|..:..|
  Fly   469 HWKMSWFYCHKCGDVFTSKVFLDYH---MHLQNRGLYICHKC----REEFELQHQLDRHFQLHRK 526

  Fly   562 ----KCEYCDATFYDHSSLSRH 579
                .|.:|...|...:.|..|
  Fly   527 GINYHCNFCRLEFLSEAKLLAH 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1603NP_001260778.1 MADF_DNA_bdg 202..287 CDD:287510 19/96 (20%)
GT1 321..408 CDD:304916 12/89 (13%)
C2H2 Zn finger 420..441 CDD:275368 7/32 (22%)
COG5048 <424..583 CDD:227381 50/265 (19%)
C2H2 Zn finger 450..471 CDD:275368 8/84 (10%)
C2H2 Zn finger 478..498 CDD:275368 7/22 (32%)
zf-H2C2_2 490..513 CDD:290200 5/31 (16%)
C2H2 Zn finger 506..527 CDD:275368 8/20 (40%)
C2H2 Zn finger 535..555 CDD:275368 6/19 (32%)
C2H2 Zn finger 563..583 CDD:275368 5/17 (29%)
CG11906NP_611402.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457178
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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